Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5357 |
Symbol | |
ID | 3714828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 6016110 |
End bp | 6017327 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | major facilitator transporter |
Protein accession | YP_351085 |
Protein GI | 77461578 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0210588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGACG GACAATCTGT GGTGACCCGA CGACAGCGGC GCGGGGCTGT CAGTCTGTTG CTGGCAATGG TGTTGCTCGG CGTCTTTCCC TTGGATGTCC TGCTGCCTTC GTTCCCGGCC CTGGCCGAAC ACTTTCGCCG CACCCCGGCG GACATCGCCC TGTCGGTCAG CCTGTTTGCG GTCGGGATTG CCTTCGCCCA GTTGCTGATC GGGCCGCTGT CGGATGTGAT CGGACGCAAG GGACTGCTGC TCGCCGGCAT GAGCGTTTCC ATACTCGGTG CCCTCGGGTG CGTGATGACC TCGGACTATT CGCTGTTTCT GATTTTTCGG GTGGTGCAGG CGCTGGGGTG CGGTTGCTTC GTGCTGTCAC AGGCGCTGGT GCAGGACCTG TTTGAAGGCG AGCAACGTGA TCGCCTGAGG ATCCTGATGG TGACCGCCGG CGGGATTTTC ATCTCGGTAT CGCCGCTGGC TGGCACCTTT CTTCAGGCGA CATTGGGCTG GCGCGGCAGT TTCTGGGTAT TCATCGCATT ATCAGCCGCA GTGCTGCTCA AGGCCTGGAT GTTTCTGGAG AACTCCCGAC CGAGCGCCAG CGGCACACGT ACGAACTTCC TCACGGCCTA TCGACGGGTT CTGGGAGATT TCGACTTCGT CGGTTACTGG CTGATTTCAG CGTTTGCATT CGCCTGCCAC TTTTCATTCA TCGTGATCTC GCCGCTGATC TTCATGGATC GGCTGCAACT GACCGCTTAC GAATTTTCGT TGATCCTGCT GATCTACGGT GCGGCTTACG TCACCGGGGG CATCCTCGCC AGCGTGCTGA GCAGGCGTAT CAACAGCGGC CAGCAGATGG TCGTCGGCCT GAGCCTGATC CTGTTCGCCG GCGTGGCCAT GCTGTACCTG GCGTCGAACT TTGCACTGGC TCCGGCGACC GTGCTGATCC CGATGCTGAT CTGCACCGCC GGCACCACCA TTGCCCGGCC GGCGGCCACG TCCCGGGCCA TGAGTCTGTT TCCGGAAAAC GCCGGCACCT CGGCCTCGGC CGGCAGCACG ATCATTTTCA TCTGCGGCGG CTTGATCAGT GCCTTGATCA GCCTGAGCCC GACCAATCTG CAATCCACGC TGGGCTACAG CTTCGTGATA CTCAGCGGGG TGGCACTGGC AATGAACGCG CGGATCAGCC GGCGCAACGA TCTCGAGGGG CAACCGGACA GCGATTAA
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Protein sequence | MDDGQSVVTR RQRRGAVSLL LAMVLLGVFP LDVLLPSFPA LAEHFRRTPA DIALSVSLFA VGIAFAQLLI GPLSDVIGRK GLLLAGMSVS ILGALGCVMT SDYSLFLIFR VVQALGCGCF VLSQALVQDL FEGEQRDRLR ILMVTAGGIF ISVSPLAGTF LQATLGWRGS FWVFIALSAA VLLKAWMFLE NSRPSASGTR TNFLTAYRRV LGDFDFVGYW LISAFAFACH FSFIVISPLI FMDRLQLTAY EFSLILLIYG AAYVTGGILA SVLSRRINSG QQMVVGLSLI LFAGVAMLYL ASNFALAPAT VLIPMLICTA GTTIARPAAT SRAMSLFPEN AGTSASAGST IIFICGGLIS ALISLSPTNL QSTLGYSFVI LSGVALAMNA RISRRNDLEG QPDSD
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