Gene Pfl01_5357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5357 
Symbol 
ID3714828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6016110 
End bp6017327 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content61% 
IMG OID 
Productmajor facilitator transporter 
Protein accessionYP_351085 
Protein GI77461578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0210588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGACG GACAATCTGT GGTGACCCGA CGACAGCGGC GCGGGGCTGT CAGTCTGTTG 
CTGGCAATGG TGTTGCTCGG CGTCTTTCCC TTGGATGTCC TGCTGCCTTC GTTCCCGGCC
CTGGCCGAAC ACTTTCGCCG CACCCCGGCG GACATCGCCC TGTCGGTCAG CCTGTTTGCG
GTCGGGATTG CCTTCGCCCA GTTGCTGATC GGGCCGCTGT CGGATGTGAT CGGACGCAAG
GGACTGCTGC TCGCCGGCAT GAGCGTTTCC ATACTCGGTG CCCTCGGGTG CGTGATGACC
TCGGACTATT CGCTGTTTCT GATTTTTCGG GTGGTGCAGG CGCTGGGGTG CGGTTGCTTC
GTGCTGTCAC AGGCGCTGGT GCAGGACCTG TTTGAAGGCG AGCAACGTGA TCGCCTGAGG
ATCCTGATGG TGACCGCCGG CGGGATTTTC ATCTCGGTAT CGCCGCTGGC TGGCACCTTT
CTTCAGGCGA CATTGGGCTG GCGCGGCAGT TTCTGGGTAT TCATCGCATT ATCAGCCGCA
GTGCTGCTCA AGGCCTGGAT GTTTCTGGAG AACTCCCGAC CGAGCGCCAG CGGCACACGT
ACGAACTTCC TCACGGCCTA TCGACGGGTT CTGGGAGATT TCGACTTCGT CGGTTACTGG
CTGATTTCAG CGTTTGCATT CGCCTGCCAC TTTTCATTCA TCGTGATCTC GCCGCTGATC
TTCATGGATC GGCTGCAACT GACCGCTTAC GAATTTTCGT TGATCCTGCT GATCTACGGT
GCGGCTTACG TCACCGGGGG CATCCTCGCC AGCGTGCTGA GCAGGCGTAT CAACAGCGGC
CAGCAGATGG TCGTCGGCCT GAGCCTGATC CTGTTCGCCG GCGTGGCCAT GCTGTACCTG
GCGTCGAACT TTGCACTGGC TCCGGCGACC GTGCTGATCC CGATGCTGAT CTGCACCGCC
GGCACCACCA TTGCCCGGCC GGCGGCCACG TCCCGGGCCA TGAGTCTGTT TCCGGAAAAC
GCCGGCACCT CGGCCTCGGC CGGCAGCACG ATCATTTTCA TCTGCGGCGG CTTGATCAGT
GCCTTGATCA GCCTGAGCCC GACCAATCTG CAATCCACGC TGGGCTACAG CTTCGTGATA
CTCAGCGGGG TGGCACTGGC AATGAACGCG CGGATCAGCC GGCGCAACGA TCTCGAGGGG
CAACCGGACA GCGATTAA
 
Protein sequence
MDDGQSVVTR RQRRGAVSLL LAMVLLGVFP LDVLLPSFPA LAEHFRRTPA DIALSVSLFA 
VGIAFAQLLI GPLSDVIGRK GLLLAGMSVS ILGALGCVMT SDYSLFLIFR VVQALGCGCF
VLSQALVQDL FEGEQRDRLR ILMVTAGGIF ISVSPLAGTF LQATLGWRGS FWVFIALSAA
VLLKAWMFLE NSRPSASGTR TNFLTAYRRV LGDFDFVGYW LISAFAFACH FSFIVISPLI
FMDRLQLTAY EFSLILLIYG AAYVTGGILA SVLSRRINSG QQMVVGLSLI LFAGVAMLYL
ASNFALAPAT VLIPMLICTA GTTIARPAAT SRAMSLFPEN AGTSASAGST IIFICGGLIS
ALISLSPTNL QSTLGYSFVI LSGVALAMNA RISRRNDLEG QPDSD