Gene Pfl01_5356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5356 
Symbol 
ID3714827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6015161 
End bp6016117 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_351084 
Protein GI77461577 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0300545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCC TCGCCCCGAA GCCGGTCTTT CAGTTCACCC TGAGCGACTG GAACACCCGC 
GCCTCGGTCC GCACCAGCCC CCACGATTAC CACTTGCCGG ACAACGTGCA GGAACAACTG
GAGACCCGGC ACTGGTTTCC GCCGGCGTTC CTGCCCTATC TGGCCCACCC GTCTATTGAA
GCAGCGGGCC GTTCGATGCT GCATCGGCTC ACGGCCCGAC ATCTGGTGCA TTTTCTCGAC
TACACCACGT TGCTCGAACA CCGGATCGTC AATCGCGCCG TCGAAACCAT CGTGCATGGG
GAGCTTCCGG TCGCGGTGCC GGCGCCGATG AAAACCGCCG CGCTCCAGCT CTACACCGAC
GAGGGCTATC ACGCCCTGTT TTCCAGTCAG GTGGCGGAGC AGATCGCCAG CCTCTACGCC
ATCGCCGGGC GCCCGGTCAT GCCCAGACGG ATCACCCGGA TGAACCTGCT GATCGCACGC
ACCGGGCAGG AGCAACGTCC GCTGGCGTGC TTTCTTCTGG GTTTCGTTTC GGAAACCATC
ATTGCCCGTG AACTGCTGGA TGTCTGCCGC GACAGCCTGG TGTCCGGCGT CAACGACATG
TTGCGCGATC ACCTCACCGA CGAAGCGCGC CACAGCCGCT ATTTCACCGA AGTGTTCCAC
TACCTCTGGT TGCACCTGAA CCCGCGACAG CGAACGTTTA CCGCGACGAC CTTGCTCGAC
ATTCTGGAAA TCTTCTTCGA CGTGGATGAG CACTGGCTCC AGGAAAGCCT CCGCGGCGCG
GGTATTGCAA ACACGACGGT GAGGGAGATT CTCGGCACGA TGACAACGGC GCAAGCCCGT
CGGCAGCGGG CACGGGCCGG CAGCCTCGCC ACATTGAGCG CATTGAAAAA AGCCGGATTT
TTTACCGAAC CTCAAAACCA GACACTATTT GCCAGGGCAG GACTGATCGA TGGATGA
 
Protein sequence
MSALAPKPVF QFTLSDWNTR ASVRTSPHDY HLPDNVQEQL ETRHWFPPAF LPYLAHPSIE 
AAGRSMLHRL TARHLVHFLD YTTLLEHRIV NRAVETIVHG ELPVAVPAPM KTAALQLYTD
EGYHALFSSQ VAEQIASLYA IAGRPVMPRR ITRMNLLIAR TGQEQRPLAC FLLGFVSETI
IARELLDVCR DSLVSGVNDM LRDHLTDEAR HSRYFTEVFH YLWLHLNPRQ RTFTATTLLD
ILEIFFDVDE HWLQESLRGA GIANTTVREI LGTMTTAQAR RQRARAGSLA TLSALKKAGF
FTEPQNQTLF ARAGLIDG