Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5356 |
Symbol | |
ID | 3714827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 6015161 |
End bp | 6016117 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_351084 |
Protein GI | 77461577 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0300545 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCCC TCGCCCCGAA GCCGGTCTTT CAGTTCACCC TGAGCGACTG GAACACCCGC GCCTCGGTCC GCACCAGCCC CCACGATTAC CACTTGCCGG ACAACGTGCA GGAACAACTG GAGACCCGGC ACTGGTTTCC GCCGGCGTTC CTGCCCTATC TGGCCCACCC GTCTATTGAA GCAGCGGGCC GTTCGATGCT GCATCGGCTC ACGGCCCGAC ATCTGGTGCA TTTTCTCGAC TACACCACGT TGCTCGAACA CCGGATCGTC AATCGCGCCG TCGAAACCAT CGTGCATGGG GAGCTTCCGG TCGCGGTGCC GGCGCCGATG AAAACCGCCG CGCTCCAGCT CTACACCGAC GAGGGCTATC ACGCCCTGTT TTCCAGTCAG GTGGCGGAGC AGATCGCCAG CCTCTACGCC ATCGCCGGGC GCCCGGTCAT GCCCAGACGG ATCACCCGGA TGAACCTGCT GATCGCACGC ACCGGGCAGG AGCAACGTCC GCTGGCGTGC TTTCTTCTGG GTTTCGTTTC GGAAACCATC ATTGCCCGTG AACTGCTGGA TGTCTGCCGC GACAGCCTGG TGTCCGGCGT CAACGACATG TTGCGCGATC ACCTCACCGA CGAAGCGCGC CACAGCCGCT ATTTCACCGA AGTGTTCCAC TACCTCTGGT TGCACCTGAA CCCGCGACAG CGAACGTTTA CCGCGACGAC CTTGCTCGAC ATTCTGGAAA TCTTCTTCGA CGTGGATGAG CACTGGCTCC AGGAAAGCCT CCGCGGCGCG GGTATTGCAA ACACGACGGT GAGGGAGATT CTCGGCACGA TGACAACGGC GCAAGCCCGT CGGCAGCGGG CACGGGCCGG CAGCCTCGCC ACATTGAGCG CATTGAAAAA AGCCGGATTT TTTACCGAAC CTCAAAACCA GACACTATTT GCCAGGGCAG GACTGATCGA TGGATGA
|
Protein sequence | MSALAPKPVF QFTLSDWNTR ASVRTSPHDY HLPDNVQEQL ETRHWFPPAF LPYLAHPSIE AAGRSMLHRL TARHLVHFLD YTTLLEHRIV NRAVETIVHG ELPVAVPAPM KTAALQLYTD EGYHALFSSQ VAEQIASLYA IAGRPVMPRR ITRMNLLIAR TGQEQRPLAC FLLGFVSETI IARELLDVCR DSLVSGVNDM LRDHLTDEAR HSRYFTEVFH YLWLHLNPRQ RTFTATTLLD ILEIFFDVDE HWLQESLRGA GIANTTVREI LGTMTTAQAR RQRARAGSLA TLSALKKAGF FTEPQNQTLF ARAGLIDG
|
| |