| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5302 |
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| Symbol | |
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| ID | 3715198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 5962530 |
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| End bp | 5964200 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | malonate decarboxylase, alpha subunit |
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| Protein accession | YP_351030 |
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| Protein GI | 77461523 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.175819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.165276 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAA CCATTTCCCC CGACTCGCGC TGGACGCGGC GGCGTGACGA GAAGCAGCGG
CGCCTCGACA AGGTGCGCGG GCTGGCCGAC GGTGCGGTGT TGCCTACCGA CAAAATCGTC
GCGGCACTCG AAGCGCTGAT CCATCCGGGC GACCGTGTGG TGCTGGAGGG CAATAACCAG
AAGCAGGCGG ATTTCCTTTC CCGCGCCCTG GCCAAGGCCG ATCCGGAAAA GCTCCACGAC
CTGCACATGA TCATGCCCAG CGTCGGTCGC TCCGAGCATC TGGACCTGTT CGAACGCGGC
ATCGCCCGCA AGCTCGATTT CTCCTTCGCC GGTACCCAGA GCCTGCGCAT CAGCCAGTTG
CTCGAAGACG GTCTACTGGA GATCGGCGCG ATCCACACCT ACATCGAACT CTACGCCCGG
CTGGTGGTGG ACCTGATCCC CAACGTCGTG CTCTCGGCCG GGTTCATGGC CGACCGTGCC
GGCAACATAT ACACCGGCCC GAGCACCGAA GACACCCCGG CGCTGATTGA GCCGGCAGCG
TTCAGCGACG GCATCGTCAT CGTCCAGGTC AATCAACTGG TGGACGACGT CAGCGAACTG
CCTCGTGTGG ATATTCCGGC ATCGTGGGTG GATTTCGTGG TGGTGGCGGA CAAGCCGTTC
TACATCGAAC CGCTGTTCAC GCGCGACCCC CGGCACATCA AGCCTGTGCA CGTGCTGATG
GCGATGATGG CGATCCGCGG GATCTACGAA AAACACAACG TGCAGTCGCT GAACCACGGC
ATCGGTTTCA ACACCGCCGC CATCGAACTG ATCCTGCCGA CCTACGGCGA ATCCCTCGGC
CTCAAGGGCA AGATCTGCCG CAACTGGACG CTCAACCCGC ACCCGACGTT GATCCCGGCG
ATTGAAAGCG GCTGGGTCGA AAGCGTGCAT TGCTTTGGCA CCGAACTGGG CATGGAAAAC
TACATCGCCG CCCGGCCCGA TGTGTTCTTC ACCGGCCGCG ACGGCTCGCT GCGTTCCAAC
CGGATGTTCT GCCAACTGGC CGGGCAGTAC GCGGTGGACC TGTTCATCGG CGCGACCCTG
CAGGTCGATG GCGACGGCCA TTCCTCCACC GTCACCCGAG GCCGCCTCGC CGGTTTCGGT
GGCGCACCGA ACATGGGTCA CGATCCGCGC GGTCGCCGTC ACGGCACCCC GGCGTGGCTC
GACATGCGCC ACGACGACTC GCAGCAACCG ATGCTCGAAC GCGGCAAGAA ACTTGTGGTG
CAGATGGTCG AGACGTTCCA GGAGGGCGGC AAACCGACCT TCGTCGAAAC CCTCGACGCG
GTAGAGGTGG CGAAGAAAAG CGGGATGCCG CTGGCGCCGA TCATGATCTA CGGCGACGAC
GTCACTCACC TGCTCACCGA AGAAGGCATC GCCTACCTGT ACAAGGCGCG CTCGCTGGAA
GAGCGTCAGG CGATGATCGC TGCGGTCGCT GGCGTCACCG CCATCGGCCT GCGCCATAAC
CCGAAAGACA CCGAACGCAT GCGCCGCGAA GGCCTGATCG CCTTGCCCGA AGACCTCGGC
ATCCGTCGCA CCGACGCCAC CCGCGAACTG CTCGCGGCGA AGAGCGTGGC CGATCTGGTC
GAGTGGTCCG GCGGCCTCTA CAACCCGCCC GCCAAGTTCA GGAGCTGGTA A
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| Protein sequence | MTTTISPDSR WTRRRDEKQR RLDKVRGLAD GAVLPTDKIV AALEALIHPG DRVVLEGNNQ
KQADFLSRAL AKADPEKLHD LHMIMPSVGR SEHLDLFERG IARKLDFSFA GTQSLRISQL
LEDGLLEIGA IHTYIELYAR LVVDLIPNVV LSAGFMADRA GNIYTGPSTE DTPALIEPAA
FSDGIVIVQV NQLVDDVSEL PRVDIPASWV DFVVVADKPF YIEPLFTRDP RHIKPVHVLM
AMMAIRGIYE KHNVQSLNHG IGFNTAAIEL ILPTYGESLG LKGKICRNWT LNPHPTLIPA
IESGWVESVH CFGTELGMEN YIAARPDVFF TGRDGSLRSN RMFCQLAGQY AVDLFIGATL
QVDGDGHSST VTRGRLAGFG GAPNMGHDPR GRRHGTPAWL DMRHDDSQQP MLERGKKLVV
QMVETFQEGG KPTFVETLDA VEVAKKSGMP LAPIMIYGDD VTHLLTEEGI AYLYKARSLE
ERQAMIAAVA GVTAIGLRHN PKDTERMRRE GLIALPEDLG IRRTDATREL LAAKSVADLV
EWSGGLYNPP AKFRSW
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