Gene Pfl01_5258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5258 
Symbol 
ID3715768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5919765 
End bp5920016 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content50% 
IMG OID 
ProductXRE family transcriptional regulator 
Protein accessionYP_350986 
Protein GI77461479 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.787301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTACG TCTTATTGAT CAGCCGTCTA GGTAATCAAC TACGCGAAAA ACGTATAGCT 
TGTGGCCTGA CGCAAGTACA ACTTGCCAAA CTCGCGGGGC TGACACGATA CAAAATCATC
GCTGTAGAGA AAGGCACTCC ATCTGTCAGC ATGATCGCTT ACGCACGCAC CTTGGCGGCT
CTGGATAGTG AGCTTGTTGT CATTCCAGCG GTTATGCCGA CTCTTGAAGA GCTCGCGGAG
GTATTCAAAT GA
 
Protein sequence
MDYVLLISRL GNQLREKRIA CGLTQVQLAK LAGLTRYKII AVEKGTPSVS MIAYARTLAA 
LDSELVVIPA VMPTLEELAE VFK