Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5213 |
Symbol | |
ID | 3716458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5861772 |
End bp | 5863220 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_350941 |
Protein GI | 77461434 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00995542 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAACCCTC GACCACATGA TCCCTGCGGC GTTGAGGATG CCGCCGGCAA TCTGCTCGGC CAGGCGCTGA CCGCCAGTGC TCGCCATCTG GCGTTCGGCA TCGCGCGTGT GCAGTTCAAT CAACAAGTCG CATATTTCGC CAAGCACATC ACCGATGAGG TTGCCGCCGG ACGCCTGACT CCGGAGCAGG GAATCCTTGC GCTTGTGCAG GAACAACACA ACCTGCTGAA CCAGTCTCGG ATCCTGCAGC AAAACAGGCA CGGAGCGATC ACCGGCACGG CCAAGGCACG ACGCTTGTCG ATGCTCCCAC AGCCTGCAGC AACTCCCGAT CCGGAACGTC TGCTGCGGGC CGCTCACCAG CAGAACCTGA AAGTGACACG CCCGAACTCA GCCCCGCCCT CCTCTCCGCG TCCGGTCAAC GACTTGCGAA TGGTTCCCCG CGAGCATTGG CCGCAGGAGC TGCCGGCGCC CGAAGAGCCA GGGTTCTACA TCGTGCCCAA AAGCGTGTCC GCCGAGAAAC TTCAGGCGCA GCTGTTTGCG TCGCCAAACC CGAGTGTCAT CGCCAAATTC AAAAGCCTGA ATCCACTGGA GGACGTGGTG AAGGCCGGAT CGATGATTGT TCTGAGTGAT CCAGACAATC AGCAATGCAC CTATGAAGAA TCACTGCTGA TGGAAACCGC GCACATCGTC AGCATGGCGC TGGCGCCGTT GACGGTGGAA GAGGCGGACT TTTTTGCCCA GCACTATGAG GTCATCAGAC GGACGCTTTC AGATGGGTCA AAAGTTATTG GGGTTGGTAC TGCCATGGCG GCTAATCATC TGGATGGCAT AAAAGCCGCT TTGAAAGAAA TTGAGGCATT GCATATCAGC ACTATCGAGA CCAATGGCAG CCTGAACTCA AAAGCATTCA AAAAGCGGCG CGCCGAATTA CTTCAACGGC TGGACGGACA GCTAACCGGA TTGACGAAGA AAGTCATTGG CCTCCCTGAT CACCCAAACC TCAAGATCGC TCTAGGAATC GAGCATCCGC ACCTGGTGCA CCGCTGGAGG AAGGCTGGCG GCATCGGCCA GCCGCCCGGG TACGCCACTC ACATTCAAGG CGTGGTGAAA GCCTCGCAAT ACGTAAAATA TGGCGGATGG ATTGGTACGG CCGTGGCTGG CGGAGCCTCG GTAATGAAGG TTCAGGATGT CTGTACGAAC GAGAACGCCG AGGAGTGCGA AAAGATTAAA TTCACCGAAA CCGGAAGTTT TCTGGGTGGA GCTGTCGGTT CTGCTGTAGG TGCAAGCACG GCCTCCACCA TTTGCGTAGC ACTCGGGGTA TCCAGTGCAG GAATCGGTGG GGCACTGTGC GGGATCGTGG TTGCGGGAGC CGGATCCTTT ACGGTCGGCT ATATGGGCGA AAAAGGCGGC GAAATCGCCG GTGAATTGAT TTACGAGAAA ACCCGATGA
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Protein sequence | MNPRPHDPCG VEDAAGNLLG QALTASARHL AFGIARVQFN QQVAYFAKHI TDEVAAGRLT PEQGILALVQ EQHNLLNQSR ILQQNRHGAI TGTAKARRLS MLPQPAATPD PERLLRAAHQ QNLKVTRPNS APPSSPRPVN DLRMVPREHW PQELPAPEEP GFYIVPKSVS AEKLQAQLFA SPNPSVIAKF KSLNPLEDVV KAGSMIVLSD PDNQQCTYEE SLLMETAHIV SMALAPLTVE EADFFAQHYE VIRRTLSDGS KVIGVGTAMA ANHLDGIKAA LKEIEALHIS TIETNGSLNS KAFKKRRAEL LQRLDGQLTG LTKKVIGLPD HPNLKIALGI EHPHLVHRWR KAGGIGQPPG YATHIQGVVK ASQYVKYGGW IGTAVAGGAS VMKVQDVCTN ENAEECEKIK FTETGSFLGG AVGSAVGAST ASTICVALGV SSAGIGGALC GIVVAGAGSF TVGYMGEKGG EIAGELIYEK TR
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