Gene Pfl01_5213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5213 
Symbol 
ID3716458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5861772 
End bp5863220 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350941 
Protein GI77461434 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00995542 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAACCCTC GACCACATGA TCCCTGCGGC GTTGAGGATG CCGCCGGCAA TCTGCTCGGC 
CAGGCGCTGA CCGCCAGTGC TCGCCATCTG GCGTTCGGCA TCGCGCGTGT GCAGTTCAAT
CAACAAGTCG CATATTTCGC CAAGCACATC ACCGATGAGG TTGCCGCCGG ACGCCTGACT
CCGGAGCAGG GAATCCTTGC GCTTGTGCAG GAACAACACA ACCTGCTGAA CCAGTCTCGG
ATCCTGCAGC AAAACAGGCA CGGAGCGATC ACCGGCACGG CCAAGGCACG ACGCTTGTCG
ATGCTCCCAC AGCCTGCAGC AACTCCCGAT CCGGAACGTC TGCTGCGGGC CGCTCACCAG
CAGAACCTGA AAGTGACACG CCCGAACTCA GCCCCGCCCT CCTCTCCGCG TCCGGTCAAC
GACTTGCGAA TGGTTCCCCG CGAGCATTGG CCGCAGGAGC TGCCGGCGCC CGAAGAGCCA
GGGTTCTACA TCGTGCCCAA AAGCGTGTCC GCCGAGAAAC TTCAGGCGCA GCTGTTTGCG
TCGCCAAACC CGAGTGTCAT CGCCAAATTC AAAAGCCTGA ATCCACTGGA GGACGTGGTG
AAGGCCGGAT CGATGATTGT TCTGAGTGAT CCAGACAATC AGCAATGCAC CTATGAAGAA
TCACTGCTGA TGGAAACCGC GCACATCGTC AGCATGGCGC TGGCGCCGTT GACGGTGGAA
GAGGCGGACT TTTTTGCCCA GCACTATGAG GTCATCAGAC GGACGCTTTC AGATGGGTCA
AAAGTTATTG GGGTTGGTAC TGCCATGGCG GCTAATCATC TGGATGGCAT AAAAGCCGCT
TTGAAAGAAA TTGAGGCATT GCATATCAGC ACTATCGAGA CCAATGGCAG CCTGAACTCA
AAAGCATTCA AAAAGCGGCG CGCCGAATTA CTTCAACGGC TGGACGGACA GCTAACCGGA
TTGACGAAGA AAGTCATTGG CCTCCCTGAT CACCCAAACC TCAAGATCGC TCTAGGAATC
GAGCATCCGC ACCTGGTGCA CCGCTGGAGG AAGGCTGGCG GCATCGGCCA GCCGCCCGGG
TACGCCACTC ACATTCAAGG CGTGGTGAAA GCCTCGCAAT ACGTAAAATA TGGCGGATGG
ATTGGTACGG CCGTGGCTGG CGGAGCCTCG GTAATGAAGG TTCAGGATGT CTGTACGAAC
GAGAACGCCG AGGAGTGCGA AAAGATTAAA TTCACCGAAA CCGGAAGTTT TCTGGGTGGA
GCTGTCGGTT CTGCTGTAGG TGCAAGCACG GCCTCCACCA TTTGCGTAGC ACTCGGGGTA
TCCAGTGCAG GAATCGGTGG GGCACTGTGC GGGATCGTGG TTGCGGGAGC CGGATCCTTT
ACGGTCGGCT ATATGGGCGA AAAAGGCGGC GAAATCGCCG GTGAATTGAT TTACGAGAAA
ACCCGATGA
 
Protein sequence
MNPRPHDPCG VEDAAGNLLG QALTASARHL AFGIARVQFN QQVAYFAKHI TDEVAAGRLT 
PEQGILALVQ EQHNLLNQSR ILQQNRHGAI TGTAKARRLS MLPQPAATPD PERLLRAAHQ
QNLKVTRPNS APPSSPRPVN DLRMVPREHW PQELPAPEEP GFYIVPKSVS AEKLQAQLFA
SPNPSVIAKF KSLNPLEDVV KAGSMIVLSD PDNQQCTYEE SLLMETAHIV SMALAPLTVE
EADFFAQHYE VIRRTLSDGS KVIGVGTAMA ANHLDGIKAA LKEIEALHIS TIETNGSLNS
KAFKKRRAEL LQRLDGQLTG LTKKVIGLPD HPNLKIALGI EHPHLVHRWR KAGGIGQPPG
YATHIQGVVK ASQYVKYGGW IGTAVAGGAS VMKVQDVCTN ENAEECEKIK FTETGSFLGG
AVGSAVGAST ASTICVALGV SSAGIGGALC GIVVAGAGSF TVGYMGEKGG EIAGELIYEK
TR