Gene Pfl01_5174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5174 
Symbol 
ID3716764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5819299 
End bp5820030 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content66% 
IMG OID 
ProductAlpha/beta hydrolase fold 
Protein accessionYP_350902 
Protein GI77461395 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.152016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.266185 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGATC GCCTGATTCT GCTACCGGGC TGGGGCCTCG GCGTTTCGCC GCTGGAGCCG 
CTGGCCGCTG CGTTGCGCGG ACTCGACGAA CACCTGCAGG TCGACATCGA GCCGTTGCCG
GAGCTGGACT CCAGCGATCT GCAAGACTGG CTCGACGAGC TCGATGAGCG CATCTCCGAA
GATGCATGGC TCGGTGGCTG GTCACTGGGA GGCATGCTCG CGTCCGAGCT GGCGGCGCGG
CGTGGCGAAC ATTGTTGCGG CTTGCTGACC CTGGCGAGCA ATCCTTCGTT TGTCGCCCAT
GAACAGTGGC AGAGCGCGAT GCCCGGCGAG ACCTTCGATG CGTTTCTGGC CGGCTGCAGC
GCCGACCCGC GCACGACCCT CAAGCGATTC TCTCTGTTGT GCGCCCAGGG CGCGCAAGAT
GCGCGCGGCT TGTCGCGGCT GTTGCTCGGC GGCGCGCCGA ATACCTCGCC GGCCGCGTTG
ATGGCCGGTC TGGAATTGTT GGCGCAGATC GATACGCGCG CTGCCTTGCA GGCGTTTCGT
GGCCCGCAAT TGCATCTGTT CGGCGGGCTG GACGGGTTGG TGCCGGCGGA GGCCGCGGGC
GAGCTGTTCG CGTTGCTGGC GGATGTCGAG GTCGGCCTGA TCGAGCAGGC CAGCCATGCG
TTTCTTCTGG AGGATCCCCA CGGTGTGGCG GGTGCAATCC AGGCGTTTTT AAGTGAGTGC
GGTGATGACT GA
 
Protein sequence
MRDRLILLPG WGLGVSPLEP LAAALRGLDE HLQVDIEPLP ELDSSDLQDW LDELDERISE 
DAWLGGWSLG GMLASELAAR RGEHCCGLLT LASNPSFVAH EQWQSAMPGE TFDAFLAGCS
ADPRTTLKRF SLLCAQGAQD ARGLSRLLLG GAPNTSPAAL MAGLELLAQI DTRAALQAFR
GPQLHLFGGL DGLVPAEAAG ELFALLADVE VGLIEQASHA FLLEDPHGVA GAIQAFLSEC
GDD