Gene Pfl01_5112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5112 
Symbol 
ID3716452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5744690 
End bp5745388 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350840 
Protein GI77461333 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCCA CGTCCCTGAC CATCGAAGCC GGTCTGCAAG CCGAACAGGA TTTGCTGGCC 
TCGGTCTGCG CGGGTGATGC CGAATTCGGC TTGTTGTTCT GGCAGCCCAG CGACCGCGCC
TTGGTCATGC CGCGCCGTTT GAATCGCTTG CCCGGATTCG ATCACGCCTG CGAAGTCTCC
GCTGCTGCCG GCTGGCCGGT ACTGCTGCGT GAAACCGGCG GCGAACCTGT TCCGCAATCG
GCGTCGACCA TCAACATTGC ACTGGTCTAC GCACCGCCTC GCAGCGAAGG CGATCTGAAC
CGTATCGAAA CCGGTTACCG GCGTCTGTGT GATCCGATCT GTGAGTTGCT GGATGAGTTG
GGTGGCACTT CGTCGCTGGG GGAAATCGAC GGTGCGTTCT GCGACGGCCG CTTCAACGTC
AATCTCGACG GTCGCAAGAT GGTCGGCACC GCTCAGCGCT GGCGCCAGAG TCAGGGTGGT
CAGCGTCCGG TGGGATTGGT GCACGGTGCG ATGCTGGTGG ATGACGAACG TGAGTCGATG
GTCGCGGCGG TCAACCGCTT CAACGAAGCG TGTGGCCTGG AGCAACGGGT TCGTGCCGCC
AGCCACATCG CTCTGCATGA AAAATTCCCG GCGCCCCATG CGCTGGCGCG TCTTGATGAA
CTCTTCCGTT TGATGCTCGC GCAGATCTAC GCCGGCTGA
 
Protein sequence
MIPTSLTIEA GLQAEQDLLA SVCAGDAEFG LLFWQPSDRA LVMPRRLNRL PGFDHACEVS 
AAAGWPVLLR ETGGEPVPQS ASTINIALVY APPRSEGDLN RIETGYRRLC DPICELLDEL
GGTSSLGEID GAFCDGRFNV NLDGRKMVGT AQRWRQSQGG QRPVGLVHGA MLVDDERESM
VAAVNRFNEA CGLEQRVRAA SHIALHEKFP APHALARLDE LFRLMLAQIY AG