| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5033 |
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| Symbol | |
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| ID | 3713767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 5668630 |
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| End bp | 5670735 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_350761 |
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| Protein GI | 77461254 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.149124 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCAGGT TCAGGATCGC GATTCTATTG GGGGCATTGC TGTTGTTCGG TGGCAATGCA
GTGCAAGCCG CCAGCCTGCC GGGTGTTCCG GCGGCCAGTG AAGAGCCGGC CAAACCGGAA
CCGATCGTGC AGGGCGGACT GCTCGGCGCC ATCAGTTCCG GCATCGACGA CGTGCAGGAC
AAACTCGATC TCAACGAGCA TCTGGTCGAC GCCTGGCGCC TGCGCGCCGA CCGGGCGGCG
GATGAGGTCG ACAGGCTGGT CAATCAACCT TCGAACCGCT CGGGCTGGAG CGTGGCGGGG
GATTTCCTGA TGCTTTCAGG CGTGTGGCTG GGCACGTTTG CCGTGTTGAC GGTGCTCGGC
AGTGTGCTGG GCAAGCGTCT GCGGGAAGGG CGCTGGTTGC GCACACGTCA GCGCAGCCAG
GATTTGCTCG GTTACCTGTT GCCCTACACG CTGCCCGCAC TCATCTGTCT GCCGCTGACC
CTGTACGTCA GCCATTTTCT GTCGGCCTCG GTCGGTCGGG CGCTGGCGCT GTGTTTTGCC
TACGCCACCA GCAGCGGGAT ATTTTCCACG TCGATGCTGT TGTGCGTGGT GGTGATGTTC
AACGTCGGCC ACAAGCGCCG CGCCGTGCAG ATCATCCGCG ACTACTGCCC GAAACCGCTG
TTCCTGATCG GCTTTCTCGC CGCGTTGAGT GACGCCCTGA CCAGCCCGCA GATCGCCCGG
CAACTGGGCG GCAACATCAC CAGCAGCATT GCGGTGTTCA CCGGTCTGCT GGCGTCGATC
ATCTTCGGCC TGCTGGTGAT TCGCCTGCGT CGTCCGGTGG CGCACCTCAT CCGTAATCGC
CCGCTGGCCC AGCGCCTGAA GCAACCGTCG CTGCAGGAAT CGCTGCGGAT TTTTTCCGGG
CTCTGGTATT GGCCGATCGT GCTGATGGTG CTGGTCTCGG CGGTGAATCT GATAGGCATC
GGCGAGGACA ACCAGAAAGC CCTGCGCTGC GCGTTGCTCA CCACGGTGCT ATTGATCGGC
GCGGTTTTTC TCAGCACCGT GCTGCAGCAC CTGTTCAAGT CGCGCAGGGC CGAGGCGATT
CAGCGCAGCA GTGCCTACAA GGAACGTTTC CTCAGCCTGT TGCACGCCTT GCTGCGGATC
GTCATTGCAA TTGCATTCAT CGATATTCTC GGGCGGATCT GGGGCGTGTC GCTGCTCGAC
TTTGCCCAGA GCAGCACGGT CGGGCGGGCG ATCAGCAATG CGCTGAGTAG CATCGGCCTG
ATCATTCTCG TGACGTGGCT GCTGTGGGTG GTGCTCGACA CGGCGATTCA GGAGGCGCTG
AAACCGCCAG TCAGCAAACG CTCGGCGCGC CAGCCCAGCA CTCGGGTGAA AACCATCCTG
CCGCTGCTGC GCAACGCGAT CAAAATCATC CTGGTGGTGA TCTGTGCGAT CACCACCATG
GCCAATCTCG GGATCAACGT CGCACCGCTG CTGGCCGGTG CCGGGGTGGT CGGCCTGGCC
ATCGGTTTCG GCTCGCAGCA ATTGGTGCAG GACGTGATTA CCGGGTTGTT CATCATCATC
GAAGACACCC TGTCGATCGG CGACTGGGTG GTGCTCGATT CCGGGCACGC CGGCACGGTC
GAAGGCCTGA CCATTCGCAC CCTGCGCCTG CGCGACGGCA AGGGCTTCGT GCACTCGGTG
CCGTTCGGCC AGATCAAGGC CGTGACCAAT CAATCGCGGC AGTTTGCGTT CGCGTTTTTC
TCGGTGCAGT TCACCTACGA CACCGATGTC GACAAGGCCA TCGAACTGAT CCGCGAGGCG
GGGGATTCGA TTCGCGAAGA CCCGTTCCTC AAGTACAACC TGCAAGGGCC GCTGGATGTG
TTCGGTGTGG ACAAGATGGA CCTGAACGGT GTGGTGCTGA CCGCGCAGTT CCGCACGGTC
TCGGGCGGGC AATACGCGGT GAGCCGCGCG TTCAACCAGC GTTTGAAAAA GCTTGTGGAT
AACAGCCCGT GGGTGCATTT CGCCCAGACT TATCCACAGC AGGTTTTGTT GCCCAAGCGC
CAGGAAGAAG AGGCGCCGCC GGCGCATTCG TCGGTGGTGT TGCCGGAGCA GGTGCGCACT
CAGTGA
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| Protein sequence | MTRFRIAILL GALLLFGGNA VQAASLPGVP AASEEPAKPE PIVQGGLLGA ISSGIDDVQD
KLDLNEHLVD AWRLRADRAA DEVDRLVNQP SNRSGWSVAG DFLMLSGVWL GTFAVLTVLG
SVLGKRLREG RWLRTRQRSQ DLLGYLLPYT LPALICLPLT LYVSHFLSAS VGRALALCFA
YATSSGIFST SMLLCVVVMF NVGHKRRAVQ IIRDYCPKPL FLIGFLAALS DALTSPQIAR
QLGGNITSSI AVFTGLLASI IFGLLVIRLR RPVAHLIRNR PLAQRLKQPS LQESLRIFSG
LWYWPIVLMV LVSAVNLIGI GEDNQKALRC ALLTTVLLIG AVFLSTVLQH LFKSRRAEAI
QRSSAYKERF LSLLHALLRI VIAIAFIDIL GRIWGVSLLD FAQSSTVGRA ISNALSSIGL
IILVTWLLWV VLDTAIQEAL KPPVSKRSAR QPSTRVKTIL PLLRNAIKII LVVICAITTM
ANLGINVAPL LAGAGVVGLA IGFGSQQLVQ DVITGLFIII EDTLSIGDWV VLDSGHAGTV
EGLTIRTLRL RDGKGFVHSV PFGQIKAVTN QSRQFAFAFF SVQFTYDTDV DKAIELIREA
GDSIREDPFL KYNLQGPLDV FGVDKMDLNG VVLTAQFRTV SGGQYAVSRA FNQRLKKLVD
NSPWVHFAQT YPQQVLLPKR QEEEAPPAHS SVVLPEQVRT Q
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