Gene Pfl01_5012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5012 
Symbol 
ID3714678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5648830 
End bp5649555 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_350740 
Protein GI77461233 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.414864 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGAC GCTGGTTGGC GATAGTGGTT TTGACCTTGC TTGGCGCCGT GGCCCAGGCA 
CAGGACGCAC CGCCGTCGGT CATTCACCTG GCCAGTGAAG ATTGGGAAGA CTACACCGCC
GCCGATGGCC ATGGCCTGGG CTGGGACGTG TTGCGCAAAG TGTTCGAGCC GGCCGGCGTG
ACCCTGGATA TTCGCACCGT GCCCTACACC CGCTCGGTGG GTCTGGTGCA ACTGAAGGAA
GCTGACGCAC TGGTCGGCTC CTATCGCGGT GAAGCCGAGC AGGTGCTGTA CCCGAAATGG
AATTTCGATT CCGACCACAT CTACGCGCTG GGTCTTGCCA GCAACCCATC GCCGACCCAG
GCGACGCTGG GCAAGTATCG ATTGGCCTGG GTGCGCGGCT ATCGCTACGA AACCTACCTG
CCGAACGTCA AACGCTTCAA CCAGATCGAG CGCCGCACCG GCATCCTGTC GATGCTCAAG
CAGGGGCGGG CGGATTACTA CATCGATGCG CTGACGGAAA TCGAAGCAGT GGTGAGAAAC
GCCGCCGATC CGTCGCAATA TCGTTATTCG CATCTGGCGG AATTGCCGCT GTACCTCGGC
TTCGCCGACA CCCCGCAAGG CCGGGCGCTG ATGTCGATCT ATGACCAGCG CATGGAGCAA
CTGGTGAAGA GCGGTGAGTT GAAGCCAATC TTCGAGCGCT GGAAGCAACC GTATCCCTTC
GAATGA
 
Protein sequence
MTRRWLAIVV LTLLGAVAQA QDAPPSVIHL ASEDWEDYTA ADGHGLGWDV LRKVFEPAGV 
TLDIRTVPYT RSVGLVQLKE ADALVGSYRG EAEQVLYPKW NFDSDHIYAL GLASNPSPTQ
ATLGKYRLAW VRGYRYETYL PNVKRFNQIE RRTGILSMLK QGRADYYIDA LTEIEAVVRN
AADPSQYRYS HLAELPLYLG FADTPQGRAL MSIYDQRMEQ LVKSGELKPI FERWKQPYPF
E