Gene Pfl01_4888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4888 
Symbol 
ID3714245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5512110 
End bp5512886 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content59% 
IMG OID 
Productoxidoreductase FAD/NAD(P)-binding 
Protein accessionYP_350616 
Protein GI77461109 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA GCAGCGAAAA ATTCAGCCGC CAGACACTGC TCGATGTGCA ACCACTGACC 
CCGAACCTGT TCACGCTGCG TACCACGCGG GATACAGGTT TCCGCTTCCG TGCCGGACAA
TTTGCCCGGA TCGGCGTGAC GCGCGAGGAT GGAAGTACGG TGTGGCGCGC CTACTCGATG
GTGTCTTCGC CGTTCGACGA ATTTCTTGAA TTCTTTTCCA TCGTGGTGCC GGGTGGTGAA
TTCACCAGTG AACTGAGCCG GCTGAAAGCC GGGGATACCT TGCTGATCGA GCGCCAGGCC
TTTGGTTATC TGACGCTGGA TCGCTTCATT GATGGCCGCG ATCTCTGGCT GTTATCCACC
GGCACAGGCG TGGCGCCGTT TCTGTCGATC CTTCAGGACT TCGAGGTCTG GGAGAAGTTT
GAACGAATCA TTCTGGTCTA CAGCGTGCGA GAGGCGCGGG AACTGGCTTA TCAGCAGCTG
ATTGCCGAGC TGACTCAGCG TGACTACCTG GCTGAATATG CTCATAAGTT CCAGTTCATC
CCGGTGGTTA CCCGTGAACC GTATGCCGGC GCCCTCAACG GGCGCATCAC CACGCTGATC
GAAAATGGCG AGCTGGAGAA TAGGGCAGGC GTGGAGCTGA CGCCGGCGCA TTCGCGAGTC
ATGCTTTGCG GTAACCCGCA GATGATCGAT GACACCCGGG CCCTGCTCAA GCAACGTGGC
ATGGCCTTGA GTCTGACCCG GCGACCGGGG CAGGTCGCGG TGGAAAACTA CTGGTAA
 
Protein sequence
MTASSEKFSR QTLLDVQPLT PNLFTLRTTR DTGFRFRAGQ FARIGVTRED GSTVWRAYSM 
VSSPFDEFLE FFSIVVPGGE FTSELSRLKA GDTLLIERQA FGYLTLDRFI DGRDLWLLST
GTGVAPFLSI LQDFEVWEKF ERIILVYSVR EARELAYQQL IAELTQRDYL AEYAHKFQFI
PVVTREPYAG ALNGRITTLI ENGELENRAG VELTPAHSRV MLCGNPQMID DTRALLKQRG
MALSLTRRPG QVAVENYW