| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4844 |
|---|
| Symbol | |
|---|
| ID | 3716844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 5465356 |
|---|
| End bp | 5465835 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | type IV pilus assembly protein PilX |
|---|
| Protein accession | YP_350572 |
|---|
| Protein GI | 77461065 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.6007 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGTTT CTCTCCATCG GCGACGGTCC CAGGGCGGCA TGGTGTTGCT GGTCAGCCTG
GTGTTTCTGC TGCTCCTGAC GGTGATCGGC CTGTCATCGA TGCAGAGCGC CAACCTGCAG
GAAAAAATGG CTGGCAGCGT GAGCCTGCGC AATCAATCGT TCCAGACTGC CGAGGCGGCA
CTGCGCATCG GCGAAAGTGC GGTGCAGCTG GATGGTTACA CGCTGGCGGT GTGTGCCAGC
ACTACTCAAT GTGCGCCGCC GGCGGAATCC TCGGTGGTCA GCGCGGCGGG GTTCAACTCC
ACGTCGGGCG TGACCTGGAT CGCCGCCGGC AGTGGGTTCT ACGGGGTGCA GAACATCGGC
ACGACCCTGA CTGCGGTGAA CGTGCCGAGC AACACCTCGG CGACCTTGTA CCGGGTCACG
GCCGTTGGCA TCGCGGGTAC TTCGCGCAGT GTGGTGGAGA GTGTCTATGC GAAGTATTGA
|
|---|
| Protein sequence | MSVSLHRRRS QGGMVLLVSL VFLLLLTVIG LSSMQSANLQ EKMAGSVSLR NQSFQTAEAA
LRIGESAVQL DGYTLAVCAS TTQCAPPAES SVVSAAGFNS TSGVTWIAAG SGFYGVQNIG
TTLTAVNVPS NTSATLYRVT AVGIAGTSRS VVESVYAKY
|
|---|
| |