| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4843 |
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| Symbol | |
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| ID | 3716843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 5462277 |
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| End bp | 5465321 |
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| Gene Length | 3045 bp |
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| Protein Length | 1014 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | type IV pilus-associated protein, putative |
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| Protein accession | YP_350571 |
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| Protein GI | 77461064 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.930911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.847694 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCCG GGCTCTATCT GGCCGCGCCG GCGTATGCCT TCACACCGTC CGATTCGCCG
CTGTTGAGCG CGGCCGCCGT GCCGCCGAAC GTGATGTTGA TGATCGACGA CTCGGGCAGC
ATGAACAGCA TCATCTATGC GACAGGATTT GATCCGACCG TGGATCGCAC GGCGGCCCGC
CAGTGCAACG CAGTCATTGG CCTGTGCCTG AGCTCGAGCG CCATTACCGG CGATACGATC
TTTCTCTCGA GCCTGCCAAC CTCCGGCTGC TCCGGCGGCG CTTATGCGTT CTACAACAAC
AGCCTGACGC CGCTCTGCCT GAAGCTGCCG GATCCGGTGG GCAGCGGCAA CACTCGCTAT
TCGGCGGATT ACATTTCCTA CGTGGTCGGG CTGGCGATCA ACAACGGCAC ACGCGACTTC
ACCACCGGGG CCATTCCCAA TGATTACCGG ATCAACGTGG CGCGCAACGT CTCCACCGCA
CTGGTCACCA GCAACCGCAA CCTGCGCATG GGCCTGGCCA CCTTCAATCC GGCTACCAGC
AACAACCCCG GCAACGGCGG TTTCATTGCA CGCTCCATCA GCGACCTGTC ACCGGTCAGC
GGCAGCGTGA CCCAGGCCCA GGCCGACACC AACTACAACG CACTGATTTC CTCGATCAAC
GGCCTGAGCG CGGTGGCCAA CACTCCCCTG GCCGAGACCT ATTATGAAAT CACCCGCTAC
ATGCGCGGGA TGGCGCCTTA CTACAACAGC ACGCCGAGCA CCTACACCAG CCCGATCCAG
TATCGCTGCC AGAAAAACTA CGGCGTGTTG ATCACTGACG GTTTGCCGAC CTACGACCGC
ACCTTTCCGA GCAACGACCC GCTGGGCGGC AGCCGCTTGC CGAACTGGGA TGGCATCAAC
AATGACGGGA ACAACCTGAA CGGGGACGGG GAGGGCGATA CGCTGTACCT GGACGATATC
GCCAAGTTCG CCTTCGACAT CGACATGCGT TCCTCCGGCA CCGACGCGGC GGGCAAGAGC
TGGAATGCGG TGGACTTTCC CAGGCAGAAC ATGAACACCT ACACCGTGGG TTTCACCGCT
TCCAACGACA TGCTCTCGGA CGCAGCGGAT TACGGACAGG GCCGCTACTA CCAGGCGACC
GACAGCGCCG GCCTGAATGC CGCGCTGTCG TCGGCACTGA GCGATATCAC CTCCAAGGCC
GGCTCCGGCG GCAGCGGTGT GGCCAGTGGC ACCACGCTCG CGAGCGGCAC CAGTTACTTC
CAGACCAGTT ATGACCCCAA GGACTGGCGC GGCACGATCA AGTCCTTTGG TTTTACCTCG
GCCGGGGCGG TCAACACCTC GGCGGTATTG TGGTCCACCG ACACGGCCAT CGTGCCCGGC
GCCACCGCGC CGACCTACCA GTCGTGGAAC ACCCTGAACA ACGCGGCGGT GACGCTGGCC
TACGGCAACC TCTCCCCGGC CCAGCAGACT GTTCTCAGCC AGGGGTTGCC CACCGGTATC
AGCGGCATCG ACCTGGTCGA ATGGAGCAAG GGCACCAACA AGACCGGGCT CAAAGTGCGC
AGCGTATTGC TCGGGGACAT CATCAACTCA CCACTGGTGC TGGCTTCGCC CACGGAAAAA
ACCGCCTCCG ATCTGGCCGG TGACACCACT TACAGTACCT ACCTGACCAC CAAAGCGTCG
AACATGAATG CCAGCCTCGT GGTGAACGCC AACGACGGTT TTGTCAGTGT CATCAACTCG
GCCAACGGTA CCCGACGCTA TGCCTACATG CCGTCCAGCG TATTGCCCTC GCTGCGCCTG
ATTGCCGATC CGAACTACGT CAACGGCGTC AGCCACAAGT TTCTGGTGGA TGGTCAGCTC
GGTGTATTCG ACGCGCAATT CGGCACGGCC TGGAAAACCC TGGCCATCGG CGGTACGGGT
GCCGGCGGCA AGACTTTCTA CGGGCTCCAG TTGTTCGATG CCTCGGCGGG CAACGTCATC
CGTGCCTTGT GGGAGGTCAG CGCTCCGGCC ACCGCCAGTA CTTCCAACGC ATTTAATGAT
CTGGGTTACG CCTATGCCCG CCCGGAAGTG GCACGCTTGG CCGATGGTCG CTGGGCGGCA
TTCATTGCCA ACGGTTACGG CAGCAACTCC GGCGTGGCGG CGCTGTATGT GCTGGATGTG
CGTGACGGCT CGCTGATCAA GAAAATCGTC ATCGACAGTA CGGAAACCAC CAACGGTTTG
TCCTCGGTGA AGCTGCGGGT CAATTCGCAG AACGTGGTGC AGGCTGCGTA TGGCGGTGAC
TTGAAGGGAC GGTTGTGGAA GTTCGACCTG AGCGCCACGT CGTCCGACAG CTGGGGCGTA
GCGTTTTCCG GCAAGCCGTT ATTTACCACG GCTGGCGGGG CGACTCAGCC GATCACCGCG
CAACCGTTGC TGGCGGACAA CGCTCTGGGT GGCAAACAGA TTTTCGTCGG CACCGGCAAA
TTCAACGAAA CCGCTGACAA GACCAACAAG GATTTGCAGG CGTTCTATTC GGTGTGGGAC
GCCGATGGCG GGTCGGGCCA GATCACGGTC AGCAGTTTGC AGGCGCAGGC GATTACCGGG
GTGCTCTCCG GCAGTACCGG GCAGTTCGTC ACCACCAGCC AGAACGACAC GACGTATCCG
GCGGAGAAGG GCTGGTACCT GCCGCTGGTG TACAACAACG CATTGACCGG CGAACGGGTG
ATCAACCAGG CCAGTCTGGT GCTGGGACGC ATCGTGTTTA CCACGGCCAG CGTCGATACC
ACAGACCCGT GTTCCAGTTT CGGTACCGGC AAACTGATCG AACTCGATGC GTTCAGCGGT
AAGATGCTCA ACTACGCGGT GCTCGACACC AACGCTGATG GCGTGGTCGA CAGCAACGAC
ACGATTTCCA GCGGCGTGGT GTTCACCGGC GGTATCCCGA CCCTGAACGC CATCGTCAAC
GGTGCATCAC GCAAGGTCGT GAACGATTCC AGTGGCGGTA TCACCACCCT GGTGGAAAAA
TCCGGCGGCG GCAGCCGTCG TATCATGTGG CGGCAAATTC AGTAA
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| Protein sequence | MLAGLYLAAP AYAFTPSDSP LLSAAAVPPN VMLMIDDSGS MNSIIYATGF DPTVDRTAAR
QCNAVIGLCL SSSAITGDTI FLSSLPTSGC SGGAYAFYNN SLTPLCLKLP DPVGSGNTRY
SADYISYVVG LAINNGTRDF TTGAIPNDYR INVARNVSTA LVTSNRNLRM GLATFNPATS
NNPGNGGFIA RSISDLSPVS GSVTQAQADT NYNALISSIN GLSAVANTPL AETYYEITRY
MRGMAPYYNS TPSTYTSPIQ YRCQKNYGVL ITDGLPTYDR TFPSNDPLGG SRLPNWDGIN
NDGNNLNGDG EGDTLYLDDI AKFAFDIDMR SSGTDAAGKS WNAVDFPRQN MNTYTVGFTA
SNDMLSDAAD YGQGRYYQAT DSAGLNAALS SALSDITSKA GSGGSGVASG TTLASGTSYF
QTSYDPKDWR GTIKSFGFTS AGAVNTSAVL WSTDTAIVPG ATAPTYQSWN TLNNAAVTLA
YGNLSPAQQT VLSQGLPTGI SGIDLVEWSK GTNKTGLKVR SVLLGDIINS PLVLASPTEK
TASDLAGDTT YSTYLTTKAS NMNASLVVNA NDGFVSVINS ANGTRRYAYM PSSVLPSLRL
IADPNYVNGV SHKFLVDGQL GVFDAQFGTA WKTLAIGGTG AGGKTFYGLQ LFDASAGNVI
RALWEVSAPA TASTSNAFND LGYAYARPEV ARLADGRWAA FIANGYGSNS GVAALYVLDV
RDGSLIKKIV IDSTETTNGL SSVKLRVNSQ NVVQAAYGGD LKGRLWKFDL SATSSDSWGV
AFSGKPLFTT AGGATQPITA QPLLADNALG GKQIFVGTGK FNETADKTNK DLQAFYSVWD
ADGGSGQITV SSLQAQAITG VLSGSTGQFV TTSQNDTTYP AEKGWYLPLV YNNALTGERV
INQASLVLGR IVFTTASVDT TDPCSSFGTG KLIELDAFSG KMLNYAVLDT NADGVVDSND
TISSGVVFTG GIPTLNAIVN GASRKVVNDS SGGITTLVEK SGGGSRRIMW RQIQ
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