Gene Pfl01_4784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4784 
Symbol 
ID3716410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5399451 
End bp5400464 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content56% 
IMG OID 
Productputative sulfite oxidase subunit YedY 
Protein accessionYP_350512 
Protein GI77461005 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00148437 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00829988 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGATCA AAGTCCCCAA AGCGTCCGAT TGCCATGAGT CGGACGTCAC GCCTGAATCC 
ATTTATCTCT CTCGCCGGCA ATTGCTCGGA GCGACCGCGG CTGGTTTGGC CATGAGCAGT
CTGCCGCGCT GGGCCAGTGC CGAAGAGGCT GCCCGCTATG CCGATGTCGA GGCCGGAAAG
GCGCCCGCCT GGTTCAACGA GAAATTACCC TCTGTCAAAT GGGGTGCGGT GAGCGTCAAG
GATGAGGCGA TCACACCTTT CAAAGACGCG ACCCATTACA ACAACTTCTA TGAATTCGGC
ACCGACAAGG GCGACCCGGC GGCCAATGCC GGTTCGTTGA AAACCGAACC GTGGAGTGTT
GTCGTGGACG GGGAGGTCGG TAAACCGGGG CGTTATGCCC TGGAAGACTT CATGAAACCG
TACCAGTTGG AGGAGCGTAT CTATCGCCTT CGTTGTGTCG AGGCGTGGTC GATGGTGATT
CCCTGGATCG GTTTCCCCAT TTCGGCGTTG TTGAAGCAGG TAGAGCCCAC TTCCAATGCC
AAATACATTC GCTTCGAAAC CTTGCAGGAT CCGAAGAGCA TGCCCGGACA GCGTTCGGGA
TTTGCCTTGA TCGATTGGCC CTATGTAGAA GGCTTGCGTC TGGATGAGGC GATGAATCCC
TTGGCGATTC TGGCGGTGGG TATGTATGGC CGTGAATTGC CAAACCAGAA CGGTGCGCCG
TTGCGTCTGG TGGTGCCGTG GAAGTATGGC TTCAAGAGCG TCAAATCCAT CGTGCGGATC
AGTCTGGTCA GCGAACAGCC GAAGACAACC TGGCAAAGCA TTGCGGCGGA TGAGTACGGG
TTCTATGCGA ATGTGAACCC CACGGTCGAC CATCCTCGTT GGACTCAGGC GCGGGAGCGG
CGACTGCCTA ACAGTCTGTT CAAACCGAAT GTGCGTGATA CGCAGATGTT CAACGGTTAT
GCGGACGAGG TCGCTTCTTT ATATACAGGG CTCGATTTGC GGAAGAACTA CTGA
 
Protein sequence
MLIKVPKASD CHESDVTPES IYLSRRQLLG ATAAGLAMSS LPRWASAEEA ARYADVEAGK 
APAWFNEKLP SVKWGAVSVK DEAITPFKDA THYNNFYEFG TDKGDPAANA GSLKTEPWSV
VVDGEVGKPG RYALEDFMKP YQLEERIYRL RCVEAWSMVI PWIGFPISAL LKQVEPTSNA
KYIRFETLQD PKSMPGQRSG FALIDWPYVE GLRLDEAMNP LAILAVGMYG RELPNQNGAP
LRLVVPWKYG FKSVKSIVRI SLVSEQPKTT WQSIAADEYG FYANVNPTVD HPRWTQARER
RLPNSLFKPN VRDTQMFNGY ADEVASLYTG LDLRKNY