| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4708 |
|---|
| Symbol | |
|---|
| ID | 3714800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 5314848 |
|---|
| End bp | 5316737 |
|---|
| Gene Length | 1890 bp |
|---|
| Protein Length | 629 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_350436 |
|---|
| Protein GI | 77460929 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0952361 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.150702 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCAG TAAACCAGTT CTGGCGCCGG GCAAAGCTGC CTCTGGCCGT CAGTCTTGCT
TCTTCGCTCG CCGGGCCCGC ATTCGGCGTC AGTTTCAACG TCGGTGAAAT CGAAGGCCAG
TTCGACTCCT CCCTGTCGAT CGGTGCCAGC TGGTCCACCC AGAGCCCGAA CAAGAACCTC
ATCGGCGTCA ACAACGGCGG TCACGGTCTG TCCCAGACTT CCGACGACGG CCATGCCAAC
TTCAAGAGCG GCGAAACGTT CTCGAAGATC TTCAAGGGCA TCCATGACCT CGAACTGAAA
TACGGCGACA CCGGCGTATT CGTCCGAGGC AAGTACTGGT ACGACTTCGA ACTGAAGGAC
GAGAGCCGCG AGTTCAAGGA CATCAGCGAC AGCAACCGCA AGGAAGGCGC CAAGTCCGCC
GGCGGTCAGA TCCTCGATGC CTTCGTTTAC CACAACTACG CGATTGCCGA TCAGCCGGGC
TCCGTGCGTC TGGGCAAGCA GGTGGTGAGC TGGGGTGAAA GTACCTTCAT CGGCGGCGGC
ATCAACTCGA TCAACCCGAT CGACGTGTCT GCGTTTCGTC GTCCGGGCGC CGAGATCAAG
GAAGGCCTGA TCCCGGTCAA CATGTTCTAC GTGTCCCAGA GCCTGACCGA CAACCTGTCC
GCCGAAGCGT TCTATCAGCT TGAGTGGGAC CAGACCGTCG TCGACAACTG CGGCACCTTC
TTCTCCCAGC CGGACATCAT TGCCGACGGT TGCGACAGCA ACCTGCGCGT GCTGAACAAG
CGTTCGACGA TTCCTGCCAT TGCTTTGGGG CCATTGGCGG CCAACGGTGT GGACGTCAAC
CAGGAAGGCG TACTGGTGCG TCGCGGAGGC GATCGCGATG CACGGGACAG CGGCCAGTGG
GGCGCGTCCT TCAAATACAT GTTCGACCCG CTCGATACCG AGTTCGGCGC GTACTTCATG
AACTACCACA GCCGTGCGCC GATCTTCAGC GCTACGGGGG CGCCACAGTC GGTCTACAAC
ACCGCCAGGG GATTGCCGGG GCCGTTCGCT GCGCTTGCAC CACTGCTGGT GGCCGGCAAT
TCGCAGTACT TCGTTGAATA CCCTGAAGAC ATTCGCCTGT ATGGCCTGAG CTTCTCCACC
ACCCTGCCTA CCGGTACGGC TTGGAGTGGC GAAATCAGCT ACCGTCCGAA CGCGCCGGTG
CAACTGAATT CCACCGACAT CCTGTTTGCC GGTGTACGTC CGCTGGGTGG TGCATTGTCC
AATGCTTCGC TGCTGACCGG TGTGCCTGGC CAGGACCTGC ACGGTTACCG TCGCAAGGAG
ATCACCCAGT TCCAGACCAC CCTGACGCAC TTCTTCGATC AGGTCATGGG CGCCAGCCGT
CTGACCCTGG TGGGCGAAGT GGGTGTGACT CACGTCGGCG GCCTGGAAAG CACCTCCGAC
GTCCGTTACG GCCGTGACCC GGTCTACGGT CCGGGCGAGT TGCCGGCCAC GGGCGGTGCC
AACACCTGCG CCAACATCCT CAACGCCAGC ACCATCAATG GTGCGGGTCC CGGCTCGCCG
CAGAACAACC GCAGCCGCAA CTGCACCGAC GAAGGCTTCA CCACCTCGAC TTCGTGGGGC
TATCGCGGTC GCGCCATCTG GGAATACAAC GACGTGTTCG CCGGCGTGAA CCTCAAGCCG
AACGTGGCCT GGTCCCACGA CGTCAGCGGC TACTCGCCAG GCCCTGGCGG CAACTTCGAA
GAAGGTCGCA AGGCGGTGAG CCTGGGCGTC GATGCCGAGT ACCAGAACAC CTACACCGCG
AGTCTGGCCT ACACCAACTT CTTCGACGGC AAGTACACCA CCGTGGATGA CCGCGACTTC
GTGGCGCTCA GCTTCGGCGT GAACTTCTAA
|
|---|
| Protein sequence | MTSVNQFWRR AKLPLAVSLA SSLAGPAFGV SFNVGEIEGQ FDSSLSIGAS WSTQSPNKNL
IGVNNGGHGL SQTSDDGHAN FKSGETFSKI FKGIHDLELK YGDTGVFVRG KYWYDFELKD
ESREFKDISD SNRKEGAKSA GGQILDAFVY HNYAIADQPG SVRLGKQVVS WGESTFIGGG
INSINPIDVS AFRRPGAEIK EGLIPVNMFY VSQSLTDNLS AEAFYQLEWD QTVVDNCGTF
FSQPDIIADG CDSNLRVLNK RSTIPAIALG PLAANGVDVN QEGVLVRRGG DRDARDSGQW
GASFKYMFDP LDTEFGAYFM NYHSRAPIFS ATGAPQSVYN TARGLPGPFA ALAPLLVAGN
SQYFVEYPED IRLYGLSFST TLPTGTAWSG EISYRPNAPV QLNSTDILFA GVRPLGGALS
NASLLTGVPG QDLHGYRRKE ITQFQTTLTH FFDQVMGASR LTLVGEVGVT HVGGLESTSD
VRYGRDPVYG PGELPATGGA NTCANILNAS TINGAGPGSP QNNRSRNCTD EGFTTSTSWG
YRGRAIWEYN DVFAGVNLKP NVAWSHDVSG YSPGPGGNFE EGRKAVSLGV DAEYQNTYTA
SLAYTNFFDG KYTTVDDRDF VALSFGVNF
|
|---|
| |