Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4643 |
Symbol | |
ID | 3713800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5241754 |
End bp | 5242245 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | endoribonuclease L-PSP |
Protein accession | YP_350371 |
Protein GI | 77460864 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.183681 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.137047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAGA GGATGACCTG CGACGAGCGC TTCATTGCCC TGGCAAAAGA GCTGAATTAC GACATCAACG GTGAGAACAC GGTGGGTGGC AATTACGCGC CATTGATCCG TCATCGCGAT GAAATCTACA TCAGCGGCAT GGTGCCGCGC ACCGAGGGCA AGATTCAGTA TCCTGGGCGA GTGGGGCAGG AGTTGACGCT CAAGGATGCG CAGGCGGCGG CAAGCATCAG CGCGATGCGC TGTCTGGCCT TTATCGTCGA TGCAGTCGGT TCGCTGGACA AGGTCAGGTC GTTGTTGCGG GTCACGGTGT ACGTGAAGTC CACGCCGGAT TTCGTTGACC TCAGCGAAGT CGCCAACGGC GCATCGGATG TATTCAGTTA TGTGTTGGGC GATGTCGGGC GACACACCCG CACCACCGTC GGCGTCTATC AGTTGCCGAA AAACGCAGCC ATCGAAGTCG ATATGATCGC CGCAGTGCAT CCTTCGGCGT AA
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Protein sequence | MTERMTCDER FIALAKELNY DINGENTVGG NYAPLIRHRD EIYISGMVPR TEGKIQYPGR VGQELTLKDA QAAASISAMR CLAFIVDAVG SLDKVRSLLR VTVYVKSTPD FVDLSEVANG ASDVFSYVLG DVGRHTRTTV GVYQLPKNAA IEVDMIAAVH PSA
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