| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4565 |
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| Symbol | |
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| ID | 3713526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 5154727 |
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| End bp | 5159649 |
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| Gene Length | 4923 bp |
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| Protein Length | 1640 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | |
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| Product | leucine-rich repeat-containing protein |
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| Protein accession | YP_350293 |
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| Protein GI | 77460786 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACGG CGCCGGCAAC CGAGCTGGAA CGCCTGTCAG CCGACAACCG TCGCGCCTGG
GGTGCGCAGA ACCGCATTGA TCGACTGCTC GGGAGCCTGC AGGACGTTTA TGCATTTGCC
GAGCCTTTGC TGAAGAAGAA GTTGCTCGAA CAGTTCAATA TCGAAGTCGA TGTGAGAAAT
ACATACGTCA GACTCTACGC GGCGGCGACA ACCCCCTGGT ACGTGATTGA TATCACGGAA
GCGTCACGGG CCCGCACCGT TTCAATGCTC GATGCCGCAC TGCACAACTT CGCGCACGGT
GAAACCTATC AACACTACTC AACATTCATT ATCAAAACCG ATGCGGCCCG CGACTTGTTC
GACGTCTCGC CGATTGGCAA AACAATCAGC ATCAGCCAGT TTCAGACGCT GTGCCGGGAA
CTGGACATCG GGGCCCAGTA CAGGGCACAT CTCGAAACAT TCCTGCTGAA CAAGGAGCCA
GTCGCCGAGA CCTATCTGCG CACACGGGTC GAGCAAAGTC AGCAAGCTGC GCTGAAGGCT
GCCGCCCGCA TGGCGCAGAT CAAAAAGGAC ATTGGCCCCG ATGCCTACGT ATTGATTCGC
GAGCTGTTGC TGGGCCGGCA GAATCTGGTA CTGGACGGTC AGGCCATGTG CGTCTGCGAT
CTGGGCCTGA TGGACCTGAC CTTGACGGGG ATCTTGATCA TTCGCCCCGA CCCGGCACAG
GCACAACACT CTCGGAAAAT GATTGCCTAC GTGCCGCACG ACCCCGACCA CCCGCTCAAG
GAATATGCCT CCACACTGGC GTTCATGGAC GAGCTGACAC GCCAGTTACG TGCAAACAGA
ACGCTGCCGT CTTCCGGTAT CAGCTATCGC CAGTTTTTCA GCCAGTTTGT TGATCAGGAA
CAGCGCGGGC ACTTTTTCGC CGGGCTCGAG CAGCGCCTGA CGTATGTCAA GTGGTACGCC
AGGGAACCGG GGGATCCGCG ACCGTCCTGG CGGGAAACTC CGGTCGAGAA ACCTCAGCTG
CAATTCAGCG CACCGCCGAT CACAGCCCCC CTGTGGACGT ATCTGTACCA GCAACGACTC
AATAAAATTC TCAACGACGC GCGCGGTCTC GCAGTATCGA CCGCCGATGC CGACAGCCAG
GCGCGCTGGG CCTGGTGGGA GAACTTCAAG AAGATCGCCT CGGACATCTT CAATGCCGCG
CTACTGGTGA TGACGCCCTT TGTTCCGGGA CTGGGCGAAC TGATGATGGC CTATACCGCT
TATCAGATAG TCAACGACGC CGTCGAGAGC GTGGTGGACA TGATCCAGGG GCATTGGGTC
GAGGCGGCAG AATATGTGGT GGGAGTCCTG ACCGATGTCC TGCAACTGGA AATCTTTGCC
GCCGGTTCCG AAACCGGTCA CGCATTGGGG CTCAAACCGT CACTCTTGGT CGAGGGGATG
AAACCGGTAC AGTCGTTCGA CGGCAAAACC CGTCTCTGGC ACCCGGACCT CAGACCTTAC
GAACAACCGC AGCTGGCGCC ACCGAAGACA TCACGCCCCG ATGCACTGGG GCTGCACAGG
CATGCCGGCA AGATTGTTTT GCCACTCGAG GGCAAGCACT ACGAAGTGCA GCGCGACCCG
CGCAGCGGAC TTCATCGGAT TCGCCACCCG ACACGCCCAA ACGCCTATTC GCCCGAGCTG
CGCCATAACG GTCAGGGAGC CTGGGTCCAT GAGGGCGAAA AACCGCAGGA CTGGCACGGG
CCCAGGCTCA TGCAACGCCT TGGTCATAGC GTCGATGGCT ATACCACCGC CGAACAGGAT
CACCTGCGCA ATATCAGCGG GACGCCGGAA GCTTCGCTGC GCCGCATGCA CGTCGAAAAT
GCCGCTCCCC CGCCCCTGCT GACCGACACG CTCACACGCT TCAACACCTG GAATGAGGCC
AAAAACGTGG GTCGGCTGAT CCGCTCGGGG CAGTCGCTGG ACCCGGCCTC GTACTGGTTT
GAACGAATGG TGCCGGACAT GCCCGGCTGG CCGGCCGACA AAGCCCTGAA GGTTTATGAA
AATGCCGATC TGAGCGGTAG TTATCGACAG TACGGCAACC GGCAAGCCAC GGACCGGCAG
ACGCTCGGCA TCAGCCTGGC CGACATGATG GCCGGCAAGC TCCCGGAGCG GCTCGTGAAT
TTTCTGGACG ATGCCGATAT GAAGACCTTG CTCGGCAACC AGTATCCGAA AAACCAGCGG
GCACAGGTCT TGCGCAACCA ACTGGCGGAT ATCGTGGAAA CCCGCACGCC GGACATCTTC
CAGTACCAGT ACCGACTCAA GGATCACAAC AGCGATGCCC GGGTTCAACT GCTGCAGCAG
CAGTATCCGC AACTGCCTTC CAGGGTCGCT GAAACCCTGC TGACAAGAGC GACTCCCGAT
GAACAGCAGG TCATGCTCGA GGAGCGACGC ATCCCGCTGC GCCTTAAGGT CCAGGCCCGG
GAAAGCGCTT TTGAGATCAG CGCTGCGCGC GCGGCTGAAG GCTTGCATGA GCCGGCACTG
AGCGGGGTCG ACACCGAACG CCTGACCCTC AATGCCCTGA AGTTTCATAC CGACACGTTT
GCCGATTTAC GCATGGATGT GCGCGAAGGC ACTTACGACG GTCCGCTACG CTGCAGCGCA
GGCAGTACAG AGGCCACGAC CCGACGTGTG TTGATCAGGG ACGAACATGG CCAATATGAA
GTGCGCGACG GCACGAACAA TAAACTGCAC GAGGCCGGCG ACTTGTATGA GGCCATCCTG
CTGGCGCTGC CTGCTGACAA GCGCGCGGCC CTGGGCTATC GCACCGGGCA GGGAGAAATG
TTCAGGCAAT GGGTGATGGC CAAAACCCAG GCGCCCGCCG AGCGCAGGAC ATTACTCGCC
CGGCCCCCGA TCCGCCCGGT CGTACCACTG GAAACCGAGT TGCTGCTGCG CGGAGGGGGA
CTGTCCAGAG ATGCCCGGAC CGTGGAAGAA AAAGTCAGGA ACCTCTATCC GCATTTCAAC
GAAAACGAAG TAGCGGCTTT CAGCCGATCG CTGCATGCCA ATGGCGATCC TCATGCGCAT
ATCGATCGGC TTGAACGCGA GCTCAAGACG TTGAAGCAGG AACTCGAACA GTGGCGACAA
CGCTACCTTA GCAATTGGGA TCCCGATGCC GCCGATACCA ACCTGCCTCA AGGCTACTGG
GACTATCATC GCAAGGGCGG ACGCTTCATC GCCGACCGGC TGCTGGAGTG TTTCGAAAGA
AAGTCCGAAG TGTTCGGCGA GCGCTCCACG AGCCTGGAGA GCGGCTATGC GCTGGATCTG
TCCAAGGAGT TTCTCGCCCA TGATCTTGAA CGTTGGTGGC GGGAGATGCC GAGCGAGCTC
AAGCCCTGGC TCGAACAGGT CACGACCCTG AACCTGGATG GCTCACGGTT CTCCCCGGCA
CCGAACGGTC TGCTCAAGGA CTTTCATCAT CTGCGTCAGT TCAGCGCCAG AGGCTGTGGA
TTGCCCGCAC TCCCTGAAAG CGTCGGCAAG ATGCGGCTGC TCGAGACACT GCGCCTGAAC
GACAATCAGA TCCGGTTGAC GCCTCCCGCC CTCGAGCAAC TGCGTAATCT GACACGCCTT
GAAACCCTCA GGCTGGATGA CAACCCTCTG GGCACGCCGC CGAATATCGA GCGGATGCCC
AGACTCAAGG TGTTGAGCCT GGTGAACGCC CATATCGACG CCTGGCCCGA GGGTTTGTTT
GCGAAGGCCC GGCCTCGAGG CTTCTTTCTG GACCTGCGGA TGAACACGAT CAGGGATGTC
CCCCAGGTAC CTCTGGGCTC CAATGAAGCG CAGCTGATTG CACGTTCCCG ACTTCACGGG
GACCGGTTGT CGTCGTCCGC GCGCGCCACA TTCGAGGCGT ACAGAACGTC GGTGGGCAGG
GCCCCTCACG ACACCTATTC CACTGTCGCC GATGACCTGC TCGAACGGTG GCCCGTCTCT
GTCGACACGT CCTTTATGGA AGAAACGGCG GGCGTGGGTG CCTACCGGGC GGAAGCCTGG
CATGCGGTGG CCAGCGAACC CGGTTCCGAC GGATTTTTCA GGGTTCTGCA AGACCTGACC
CGTTCCGCCG ATTACGAGCA GGGGGGAGAG GCGCAGGACC AGTTGACCGA CCGTGTATGG
CGAATGATAG GTGCCATGGA CATCGATACG CCGCTGCGCG AAGACCTGTT CCTCATGTCG
ACCGATCCTG AAGGCTGCGA GGATGCCGGC GCCCAACTGT TCAACAACAT GGGCGTCAAG
GTACTTGCCT CCGAGGCCCG CTCGTTTTCC ACCCACCGCG CGGAACTGGA AAGCAAGCTG
GTAACGCTGG CCAAGGGCTC GGCGCGCCTT GGACAAGTCG GCGAGATCGC CCGGGCAGAC
ATCCGGGCGC GCGAGGGCAA CCCCGATGAG GTCGAGGTGC ATCTGGCCTA TGAAACCGGT
CTGGCCAAAC GCCTGGAACT GCCCTGGCAG TCCGAAGCCA TGAAGTTTCG CCCGGTCGCC
GGGGTCGATG ACGCGACCAT CGACCGTGCG TACGACACAG TGATCGAGCG CGAGACAGGC
GACGGTCTGG TCAACCAGAT GATCGAGCAG CCGTTCTGGG AAGCGTACTT GCGTGAGACC
TGGCCTGGAG AATACGAAAG CAATAAACGT GTTCACCTGG AAAAATTCGA TCTGCTGGAG
GATCTGCGCT CGGCCCAGGA GGACTGGGTT CGTTCGGCAC ACCTGCCGCC GGAGCAACGT
TATTTGCGCA GGCATGCCCT CAGTGAGCTT GCCCGCAAAC TGTCCGTACC CGAGGAGGAA
GTCTTCACAC CAGAACCGAT GAGCGACCAG ACCTACGAAC GCTTGCTGCG AGACATCGGC
TATCAGGAGA AGGAACTGAG CAGAAGGCTG ACCCGCGAAG CCATGAGCCG GGCGAGGATC
TGA
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| Protein sequence | MMTAPATELE RLSADNRRAW GAQNRIDRLL GSLQDVYAFA EPLLKKKLLE QFNIEVDVRN
TYVRLYAAAT TPWYVIDITE ASRARTVSML DAALHNFAHG ETYQHYSTFI IKTDAARDLF
DVSPIGKTIS ISQFQTLCRE LDIGAQYRAH LETFLLNKEP VAETYLRTRV EQSQQAALKA
AARMAQIKKD IGPDAYVLIR ELLLGRQNLV LDGQAMCVCD LGLMDLTLTG ILIIRPDPAQ
AQHSRKMIAY VPHDPDHPLK EYASTLAFMD ELTRQLRANR TLPSSGISYR QFFSQFVDQE
QRGHFFAGLE QRLTYVKWYA REPGDPRPSW RETPVEKPQL QFSAPPITAP LWTYLYQQRL
NKILNDARGL AVSTADADSQ ARWAWWENFK KIASDIFNAA LLVMTPFVPG LGELMMAYTA
YQIVNDAVES VVDMIQGHWV EAAEYVVGVL TDVLQLEIFA AGSETGHALG LKPSLLVEGM
KPVQSFDGKT RLWHPDLRPY EQPQLAPPKT SRPDALGLHR HAGKIVLPLE GKHYEVQRDP
RSGLHRIRHP TRPNAYSPEL RHNGQGAWVH EGEKPQDWHG PRLMQRLGHS VDGYTTAEQD
HLRNISGTPE ASLRRMHVEN AAPPPLLTDT LTRFNTWNEA KNVGRLIRSG QSLDPASYWF
ERMVPDMPGW PADKALKVYE NADLSGSYRQ YGNRQATDRQ TLGISLADMM AGKLPERLVN
FLDDADMKTL LGNQYPKNQR AQVLRNQLAD IVETRTPDIF QYQYRLKDHN SDARVQLLQQ
QYPQLPSRVA ETLLTRATPD EQQVMLEERR IPLRLKVQAR ESAFEISAAR AAEGLHEPAL
SGVDTERLTL NALKFHTDTF ADLRMDVREG TYDGPLRCSA GSTEATTRRV LIRDEHGQYE
VRDGTNNKLH EAGDLYEAIL LALPADKRAA LGYRTGQGEM FRQWVMAKTQ APAERRTLLA
RPPIRPVVPL ETELLLRGGG LSRDARTVEE KVRNLYPHFN ENEVAAFSRS LHANGDPHAH
IDRLERELKT LKQELEQWRQ RYLSNWDPDA ADTNLPQGYW DYHRKGGRFI ADRLLECFER
KSEVFGERST SLESGYALDL SKEFLAHDLE RWWREMPSEL KPWLEQVTTL NLDGSRFSPA
PNGLLKDFHH LRQFSARGCG LPALPESVGK MRLLETLRLN DNQIRLTPPA LEQLRNLTRL
ETLRLDDNPL GTPPNIERMP RLKVLSLVNA HIDAWPEGLF AKARPRGFFL DLRMNTIRDV
PQVPLGSNEA QLIARSRLHG DRLSSSARAT FEAYRTSVGR APHDTYSTVA DDLLERWPVS
VDTSFMEETA GVGAYRAEAW HAVASEPGSD GFFRVLQDLT RSADYEQGGE AQDQLTDRVW
RMIGAMDIDT PLREDLFLMS TDPEGCEDAG AQLFNNMGVK VLASEARSFS THRAELESKL
VTLAKGSARL GQVGEIARAD IRAREGNPDE VEVHLAYETG LAKRLELPWQ SEAMKFRPVA
GVDDATIDRA YDTVIERETG DGLVNQMIEQ PFWEAYLRET WPGEYESNKR VHLEKFDLLE
DLRSAQEDWV RSAHLPPEQR YLRRHALSEL ARKLSVPEEE VFTPEPMSDQ TYERLLRDIG
YQEKELSRRL TREAMSRARI
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