| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4496 |
|---|
| Symbol | |
|---|
| ID | 3717755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 5071062 |
|---|
| End bp | 5071730 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_350224 |
|---|
| Protein GI | 77460717 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000259931 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGCC CGATCAAACT CGATTTTTCC GAAAAGTACG ACGACAACCA TGCGCAGAAA
TACTTGCGCA AGCATCAGGA CGGTCTGGGT CGTCGTTTGT CCAACTGGCG GGATCAGCAG
TTGGCCCGCA AGGCGTTGAC CCTTGTCGGC GAGCCGGGAC TGGTGCTCGA CCTGCCATGC
GGTGCAGGGC GTTTCTGGCC ATTGCTGGCG GAAAAGCCCA ACCGGGTGAT CATCGGAGCG
GATAACTCCG AGTCGATGAT CAAGACCGCC ATGCAGGCAC AACCGGCGGA TGTGGTGAAA
CGGGTACAAC CCTTGCACAC GTCTGCGTTC GACATTGCCT TGCCTGATAA CGCCGTCGAC
AGCATTTTCT GCATGCGACT GCTGCATCAC ATCGGCGAAG CCGAGCACCG TCGGGCGATT
TTGCGCGAAT TCGAGCGTGT CACCCGCGAC AGCGTGATCA TTTCGCTGTG GGTAGACGGC
AATTTCAAGG CCTGGAAACG CAAGCGCGCC GAACGCAAGC GTGGGCAGGA GGGTTACCAG
AACCGGTTTG TGTTACCGGC CGCAACAGTT GAAAAGGAAT TCGAGGAAGC AGGATTCCGG
ATCCAGGAAC AACTGGACTT TATTCCGCTC TATGCCATGT GGCGAGTCTA CGTATTACGC
AAGAGGTAA
|
|---|
| Protein sequence | MAGPIKLDFS EKYDDNHAQK YLRKHQDGLG RRLSNWRDQQ LARKALTLVG EPGLVLDLPC
GAGRFWPLLA EKPNRVIIGA DNSESMIKTA MQAQPADVVK RVQPLHTSAF DIALPDNAVD
SIFCMRLLHH IGEAEHRRAI LREFERVTRD SVIISLWVDG NFKAWKRKRA ERKRGQEGYQ
NRFVLPAATV EKEFEEAGFR IQEQLDFIPL YAMWRVYVLR KR
|
|---|
| |