Gene Pfl01_4403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4403 
Symbol 
ID3713306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4963878 
End bp4964957 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content57% 
IMG OID 
ProductTonB-like 
Protein accessionYP_350131 
Protein GI77460624 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.176341 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAAC AGCGAGAGCC GTCCGCCTCG GAAAGCTACT TCTGGCCCAG TGTCTGGGCG 
ATTGGCTTGC ACGTGCTGGT GTTCGGCATG CTGTTCGTCA GTTTCGCCCT GACTCCGGAG
TTGCCGCCGG CCAAGCCGAT TGTCCAGGCG ACCCTGTACC AGCTGAAATC GAAAAGTCAG
GCAACCACCC AGACCAATCA GAAGATTGCG GGTGAGGCGA AGAAATCCGC CGCGCGCCAG
ACCGAAGTCG AGCAGATGGA GCAGAAAAAG GTCGAGCAGG AAGCGGTGAA GGCTGCGGAA
CAAAAGAAAG AAGAAGCGGC TCAAAAGGCC GAGGAAGCCA AGAAGGCCGA TGAGGCGAAG
AAAGCGGACG AGGCGAAGAA GGCTGATGAA GCCAAGAAAG CCGACGACGC GAAGAAAGCC
GCCGAAGCCA AGAAGGCAGA AGAGAAACAA TTGGCTGATA TAGCCAAGAA GAAAGCCGAA
GAAGAAGCCA AGAAGGCTGC TGAAGAAGAG GCCAAGAAAG CGGCCGCTGA AGAAGCCAAG
AAGAAGATCG TCGAAGACGC GAAGAAGAAA GCCGCCGAAG ACGCCAAGAA GAAAGCTGAA
GCTGAAGAGG CGAAGAAGAA AGTCGCCGAA GACGCGAAGA AGAAAGCTGC TGCCGATGCT
GCGAAGAAGA AAGCGCAGGA CGCGGCACGT AAATCCGCCG AAGACAAAAA GGCTCAGGCC
CTGGCAGATT TGCTTTCCGA CACGCCGCAG CGCCAGCAGG CCTTGGCCGA TGAGCAGGGC
GATGAAGTCG CGGGCAGTTT CGATGACCTG ATTCGTGCGC GGGCAGCGGA AGGCTGGGCA
CGTCCACCTT CGGCACGCAA AGGCATGACG GTTGTGCTGC AGATCGGCAT GTTGCCGGAC
GGTACGGTGA CTTCGGTCAG CGTGGCCAAG TCCAGTGGTG ACGGTCCGTT CGATGCGTCG
GCAGTGGCAG CGGTCAAGAA TATTGGACGT TTGACGGAAA TGCAGGGAAT GAAGCCGAGC
GATTTCGCTC CGTATCGTTC ATTCAAGATG ACATTCACAC CTGAGGATCT AGCCTTGTGA
 
Protein sequence
MQQQREPSAS ESYFWPSVWA IGLHVLVFGM LFVSFALTPE LPPAKPIVQA TLYQLKSKSQ 
ATTQTNQKIA GEAKKSAARQ TEVEQMEQKK VEQEAVKAAE QKKEEAAQKA EEAKKADEAK
KADEAKKADE AKKADDAKKA AEAKKAEEKQ LADIAKKKAE EEAKKAAEEE AKKAAAEEAK
KKIVEDAKKK AAEDAKKKAE AEEAKKKVAE DAKKKAAADA AKKKAQDAAR KSAEDKKAQA
LADLLSDTPQ RQQALADEQG DEVAGSFDDL IRARAAEGWA RPPSARKGMT VVLQIGMLPD
GTVTSVSVAK SSGDGPFDAS AVAAVKNIGR LTEMQGMKPS DFAPYRSFKM TFTPEDLAL