Gene Pfl01_4385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4385 
Symbol 
ID3712828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4943642 
End bp4945069 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content60% 
IMG OID 
Productarginine/ornithine antiporter 
Protein accessionYP_350113 
Protein GI77460606 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.193285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAG CTCCCGGAAA ACTACGACTA GGTGCACTGG TCGCGTTGGT AGTCGGCTCA 
ATGATCGGTG GCGGGATATT CTCTTTGCCA CAAAACATGG CCGCCAGTGC CGATGTCGGC
GCGGTACTGA TTGGCTGGGC CATCACCGCT GTCGGCATGC TCACCCTCGC TTTCGTCTTC
CAAACCCTGG CCAATCGCAA GCCTGACCTG GACGGCGGTG TCTACGCCTA CGCCAAGGCC
GGTTTCGGCG ATTACATGGG TTTCTCTTCG GCCTGGGGTT ACTGGATCAG TGCCTGGCTG
GGCAACGTCG GTTACTTCGT TCTGCTGTTC AGCACTCTCG GGTATTTTTT TCCGATTTTT
GGGGAGGGCA ACACCGTTGC AGCCGTGATC GGCGCCTCTG TCCTGCTGTG GGGCGTGCAC
TTTCTGGTAC TGCGCGGGAT CAAGGAAGCG GCGTTCATCA ACCTCGTGAC CACCGTCGCC
AAGGTCGTGC CGCTGCTGCT GTTCGTATTG ATCGCGATCT TCGCCTTCAA ACTGGACATC
TTCACCGCCG ATATCTGGGG CGTGAAAAAC CCGGATCTGG GCAGCGTGAT GAACCAGGTG
CGCAACATGA TGCTGGTCAC CGTGTGGGTG TTCATCGGCA TCGAAGGCGC GAGCATCTTC
TCGGCCCGGG CGGAAAAACG TTCGGACGTC GGCAAGGCGA CCGTGATCGG TTTCATCACC
GTGCTGCTGT TCCTGGTGCT GGTGAACGTG CTGTCGCTGG GCATCATGAC TCAGCCGGAA
CTGGCAAAAC TGCAGAACCC GTCGATGGCC GCCGTGCTGG AACACGTGGT CGGTCACTGG
GGCGCGGTGC TGATCAGCGT CGGTCTGATC ATCTCGCTGC TGGGGGCGTT GCTGTCGTGG
GTGCTGCTGT GTGCGGAGAT CATGTTCGCC GCTGCCAAAG ACCACACCAT GCCGGAGTTC
CTGCGCAAGG AAAACGCCAA CCACGTGCCG GTCAACGCCC TGTGGCTGAC CAACGCGATG
GTGCAGCTGT TCCTGATCAT CACTCTGTTT TCGGCCAGCA CTTACCTGTC GCTGATCTAC
CTCGCCACTT CGATGATTCT GGTGCCGTAC CTGTGGTCGG CGGCCTACGC CCTGCTGCTG
GCGGTGCGCG GCGAAAGCTA CGAAGGCTTC GCGGCCGAAC GGCGCAAGGA CCTGATCATC
GGCGCCATCG CCCTGATCTA TGCGGTGTGG CTGCTCTACG CCGGTGGCGT GAAGTACCTG
CTGCTCTCGG CCCTGCTCTA TGCCCCCGGC GCGATCCTGT TCGCCAAGGC CAAGCTCGAA
CTCAAACAAC CGGTTTTCAC CAACGTCGAG AAGCTGATTT TCGCCGCAGT GGTCGTGGGC
GCCCTGGTGG CTGCCTACGG ACTGTATGAC GGCTTCCTGA CTCTGTAA
 
Protein sequence
MSEAPGKLRL GALVALVVGS MIGGGIFSLP QNMAASADVG AVLIGWAITA VGMLTLAFVF 
QTLANRKPDL DGGVYAYAKA GFGDYMGFSS AWGYWISAWL GNVGYFVLLF STLGYFFPIF
GEGNTVAAVI GASVLLWGVH FLVLRGIKEA AFINLVTTVA KVVPLLLFVL IAIFAFKLDI
FTADIWGVKN PDLGSVMNQV RNMMLVTVWV FIGIEGASIF SARAEKRSDV GKATVIGFIT
VLLFLVLVNV LSLGIMTQPE LAKLQNPSMA AVLEHVVGHW GAVLISVGLI ISLLGALLSW
VLLCAEIMFA AAKDHTMPEF LRKENANHVP VNALWLTNAM VQLFLIITLF SASTYLSLIY
LATSMILVPY LWSAAYALLL AVRGESYEGF AAERRKDLII GAIALIYAVW LLYAGGVKYL
LLSALLYAPG AILFAKAKLE LKQPVFTNVE KLIFAAVVVG ALVAAYGLYD GFLTL