Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4385 |
Symbol | |
ID | 3712828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4943642 |
End bp | 4945069 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | arginine/ornithine antiporter |
Protein accession | YP_350113 |
Protein GI | 77460606 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.193285 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGAAG CTCCCGGAAA ACTACGACTA GGTGCACTGG TCGCGTTGGT AGTCGGCTCA ATGATCGGTG GCGGGATATT CTCTTTGCCA CAAAACATGG CCGCCAGTGC CGATGTCGGC GCGGTACTGA TTGGCTGGGC CATCACCGCT GTCGGCATGC TCACCCTCGC TTTCGTCTTC CAAACCCTGG CCAATCGCAA GCCTGACCTG GACGGCGGTG TCTACGCCTA CGCCAAGGCC GGTTTCGGCG ATTACATGGG TTTCTCTTCG GCCTGGGGTT ACTGGATCAG TGCCTGGCTG GGCAACGTCG GTTACTTCGT TCTGCTGTTC AGCACTCTCG GGTATTTTTT TCCGATTTTT GGGGAGGGCA ACACCGTTGC AGCCGTGATC GGCGCCTCTG TCCTGCTGTG GGGCGTGCAC TTTCTGGTAC TGCGCGGGAT CAAGGAAGCG GCGTTCATCA ACCTCGTGAC CACCGTCGCC AAGGTCGTGC CGCTGCTGCT GTTCGTATTG ATCGCGATCT TCGCCTTCAA ACTGGACATC TTCACCGCCG ATATCTGGGG CGTGAAAAAC CCGGATCTGG GCAGCGTGAT GAACCAGGTG CGCAACATGA TGCTGGTCAC CGTGTGGGTG TTCATCGGCA TCGAAGGCGC GAGCATCTTC TCGGCCCGGG CGGAAAAACG TTCGGACGTC GGCAAGGCGA CCGTGATCGG TTTCATCACC GTGCTGCTGT TCCTGGTGCT GGTGAACGTG CTGTCGCTGG GCATCATGAC TCAGCCGGAA CTGGCAAAAC TGCAGAACCC GTCGATGGCC GCCGTGCTGG AACACGTGGT CGGTCACTGG GGCGCGGTGC TGATCAGCGT CGGTCTGATC ATCTCGCTGC TGGGGGCGTT GCTGTCGTGG GTGCTGCTGT GTGCGGAGAT CATGTTCGCC GCTGCCAAAG ACCACACCAT GCCGGAGTTC CTGCGCAAGG AAAACGCCAA CCACGTGCCG GTCAACGCCC TGTGGCTGAC CAACGCGATG GTGCAGCTGT TCCTGATCAT CACTCTGTTT TCGGCCAGCA CTTACCTGTC GCTGATCTAC CTCGCCACTT CGATGATTCT GGTGCCGTAC CTGTGGTCGG CGGCCTACGC CCTGCTGCTG GCGGTGCGCG GCGAAAGCTA CGAAGGCTTC GCGGCCGAAC GGCGCAAGGA CCTGATCATC GGCGCCATCG CCCTGATCTA TGCGGTGTGG CTGCTCTACG CCGGTGGCGT GAAGTACCTG CTGCTCTCGG CCCTGCTCTA TGCCCCCGGC GCGATCCTGT TCGCCAAGGC CAAGCTCGAA CTCAAACAAC CGGTTTTCAC CAACGTCGAG AAGCTGATTT TCGCCGCAGT GGTCGTGGGC GCCCTGGTGG CTGCCTACGG ACTGTATGAC GGCTTCCTGA CTCTGTAA
|
Protein sequence | MSEAPGKLRL GALVALVVGS MIGGGIFSLP QNMAASADVG AVLIGWAITA VGMLTLAFVF QTLANRKPDL DGGVYAYAKA GFGDYMGFSS AWGYWISAWL GNVGYFVLLF STLGYFFPIF GEGNTVAAVI GASVLLWGVH FLVLRGIKEA AFINLVTTVA KVVPLLLFVL IAIFAFKLDI FTADIWGVKN PDLGSVMNQV RNMMLVTVWV FIGIEGASIF SARAEKRSDV GKATVIGFIT VLLFLVLVNV LSLGIMTQPE LAKLQNPSMA AVLEHVVGHW GAVLISVGLI ISLLGALLSW VLLCAEIMFA AAKDHTMPEF LRKENANHVP VNALWLTNAM VQLFLIITLF SASTYLSLIY LATSMILVPY LWSAAYALLL AVRGESYEGF AAERRKDLII GAIALIYAVW LLYAGGVKYL LLSALLYAPG AILFAKAKLE LKQPVFTNVE KLIFAAVVVG ALVAAYGLYD GFLTL
|
| |