Gene Pfl01_4220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4220 
Symbol 
ID3717720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4763196 
End bp4764614 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content64% 
IMG OID 
Productperiplasmic sensor Signal transduction histidine kinase 
Protein accessionYP_349948 
Protein GI77460441 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.345357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.151496 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGACC TGCCGGGCCG GCACTCGCTG TTCTGGAAGC TCGCCTGTCT GCTGGTGGCG 
TTCTGTCTGC TGATGATCTG GCTGAGCTGG TCCTGGGGCT GGTACATGGA GCAGCGCAAT
CAGTTCCTCT CCGACGACGC CCGTCGCACC CTGAGCCGTT ATGCCGCCGA GGCGGAGCGC
GCCTGGCAGC AGGGCGAGCG CGATGGCATC GATAGCTGGT TGCAAAGCAT GGAGCTGCGC
GAGGCCGGCT GGGTCGGCGT GATCGGCGGC AACCTGCAGT CGCTGGGCAG CCAACCGTTC
AACGCTCAAG AGCTTCAGCA CCTGACCTTC CTGCGAGGTC TGGACTGGCC GATTCATAAA
AGGGGCCGAC CGTGGCTGCG GGTTCCGTTC CCCACTGACC CGACTGCCGG CAGTCTGGTC
ATCGAGTTGC CCGAGCGATT CCTGCCGGGG AAATACCGGG TGTTCTGGCG GGTCATCACC
AACGGTGTGA TTCCCGGCCT GTTCACCCTG CTGCTGTGCG TCGGCCTGTA TCGCCTGCTG
GTGGTGCCGC TTAACAATCT GCGCGAGCAG GCCAACGCCT GGCGCGCCGA TGAACTGAAT
GTGCGGTTGT CGAGCGGCAT CACCCAGCGC CCCGATGAAC TCGGCGAACT GGCCCGCGCC
TTCGATTCGA TGTCCGAACG CCTGCAGTCC ACCGTGGCCT TGCAACAGCA ACTGCTGCGC
GACCTGTCCC ACGAACTGCG CACGCCCCTG AGCCGGTTGC GGGTCGCCAG TGAAAGCGAG
CAACAGCTGC AACCGTTGCG CGAGCGCATC GGTCGCGAAG TCGACGTGAT GCAGCGACTA
GTGGAGGACA CCCTGCAACT GGCCTGGCTC GACACCGAAC GCGCACCGTT GCCGGACGAA
GCGATCCAGA TTCAGGCGCT GTGGGAAATG CTCACGGAAA ACGCCTGCTA CGAAAGCTGC
TGTCCGGTGG GGCAGTTGCA GTGCGGTGTT GAAGCTTCCT GCTGGGTACG CGGCAATCTC
AACACCCTGG CCCAGGCTCT GGAAAACATC CTGCGCAATG CGATTCGTCA TTCGCCACCG
GGCGGCATCG TGCGGCTCGA CGGTCGACGA GAGGGCGATT ACTGGCACCT GTGGCTGGAG
GACGAGGGCG GTGGTGTGGC CGACGCGGAT CTTGAGCGGA TCTTTTCGCC CTTCATCCGC
CTCGACGGCT CGCGGCCGGG GGATGATGGA TTCGGTCTGG GCCTGAGCAT CGCGAGGAAC
GCGGTGCAAC GCCAGGGCGG TACTTTGTGG GCTGAGAATG GCCCGTCGGG ATTGCGACTG
AATCTGCGCT TGGTGGCGGA GGACAGTGCT GTCATTCCTG AAGTCTTCGC TGGCAAGCCA
GATCCCACAG TGGACATGGG CCGCCCGCAG ATTGTGTGA
 
Protein sequence
MSDLPGRHSL FWKLACLLVA FCLLMIWLSW SWGWYMEQRN QFLSDDARRT LSRYAAEAER 
AWQQGERDGI DSWLQSMELR EAGWVGVIGG NLQSLGSQPF NAQELQHLTF LRGLDWPIHK
RGRPWLRVPF PTDPTAGSLV IELPERFLPG KYRVFWRVIT NGVIPGLFTL LLCVGLYRLL
VVPLNNLREQ ANAWRADELN VRLSSGITQR PDELGELARA FDSMSERLQS TVALQQQLLR
DLSHELRTPL SRLRVASESE QQLQPLRERI GREVDVMQRL VEDTLQLAWL DTERAPLPDE
AIQIQALWEM LTENACYESC CPVGQLQCGV EASCWVRGNL NTLAQALENI LRNAIRHSPP
GGIVRLDGRR EGDYWHLWLE DEGGGVADAD LERIFSPFIR LDGSRPGDDG FGLGLSIARN
AVQRQGGTLW AENGPSGLRL NLRLVAEDSA VIPEVFAGKP DPTVDMGRPQ IV