Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4199 |
Symbol | |
ID | 3717619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4739923 |
End bp | 4740771 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | signal transduction protein |
Protein accession | YP_349927 |
Protein GI | 77460420 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGGTA GCGTCAGCAA CTACACGAGC TATACCAGCA GCACCTCCAC CCAAAACGCC CGCAGCCAGC AACTGCAAAA GGAACTGTTC GCCAAACTCG ACAGCAACGG CGACGGCGCG GTGGATCAGG ACGAACTGGG CAGTGCCCTG TCACAAAAGT CCAATGACGG CCTGCTGGTC AGCCTGAGCA AACAATTCGG CGATCTGGAC AGCGACGCCA GCGGCAGCCT CAGCGCCGAA GAAATGACCG CCATGGCCCC ACCTCCACCG CCCCCAGGCG ACCAGGCCCC CAACACCGAA CTCGCCGACG CCCTGATCAG CGCCCTGGAC GCCGACGGCG ACGGCGCCAT CAGCAGCGAC GAACTGAGCA ACGGCCTGAC CAGCGCCGGC AGCACCGCCG ACAGCAGCAA AATCTTCTCG GCCCTGGACA AAAACGAAGA CGGCGTCGTC AGCCAGGACG AACTCGCCGC CAGCCTCGCC CCACCACCCC CGCCCCCTCA AGCCACCAGC GACGAACTGT TCAGCCAGCT CGATGCCGAC GGCGACGGCA GCGTCATCGC CACCGAGTTG AACAGTGCGT TGCAAGCCAG CGACAGCACC TCATCGAACA ACACCGACAA CGCCGCCGCC CTGCTCAAAG TGCTGGACAG CGACAGCAGC GCAGGCGTCA GCAGCGACGA ACTGAAAGCT GCACTGCATG CAGGTCGTGA GCGCCCGGAT GACGAACGGA CCGCCAGCAA TACTCAAACC ACTACCGAGG CGCTGAACCG GATGATTGCC AATCTGAGCA AGCAGTACTC GCTCGAAAAC ACTGCGTCGG TGGGCAAGTA TTTGAATGTC GCGACTTGA
|
Protein sequence | MIGSVSNYTS YTSSTSTQNA RSQQLQKELF AKLDSNGDGA VDQDELGSAL SQKSNDGLLV SLSKQFGDLD SDASGSLSAE EMTAMAPPPP PPGDQAPNTE LADALISALD ADGDGAISSD ELSNGLTSAG STADSSKIFS ALDKNEDGVV SQDELAASLA PPPPPPQATS DELFSQLDAD GDGSVIATEL NSALQASDST SSNNTDNAAA LLKVLDSDSS AGVSSDELKA ALHAGRERPD DERTASNTQT TTEALNRMIA NLSKQYSLEN TASVGKYLNV AT
|
| |