Gene Pfl01_4121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4121 
Symbol 
ID3714963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4662936 
End bp4663739 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content65% 
IMG OID 
ProductIclR family transcriptional regulator 
Protein accessionYP_349849 
Protein GI77460342 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.101535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.932917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAAG ACGCCCCGAA AACCGCCAAG GACGCCGCGC CGACCGGCAC CCAGACCCTG 
CTTCGCGGGT TGGGTGTGGT GCAGGCCGTC GCCAGTGGCG CCCGCGATCT CAAAGAGATT
GCCCGCCTGA TCGGTACCAC GCGCAGCACC ACCCATCGTC TGGCCAGTTG TCTGGTGGAC
GAGCGCTACC TGCGCGTCGT GCCGCAAGTC GGTTATCTGT TGGGGCCGAA GCTGATCGAA
CTGGGTTTCC AGGCGCGTGA GGAATTGCCG CTGGTGACCC TGGCCGGGCC TTATCTGGAC
GAGTTGTCGG CGCTGACCGG CGACACCGTT CACCTGGGCA TTCGTGAAGG CGACGAGGTG
CTTTATTTGC TGAAGAATCC GGGGCGCAAC GGCCCGGAAA TGCGCTCGCG GGTCGGCCAT
CGCATGCCGC TGGCGCGGAC CGGGATCGGC AAGGCGCTGA TGCTGGATGA CGCACCGCAG
GACTGGCAGC GTCTGTACGA CATCAGTCTG CCGGCGGGTG GGAAAAGTCA GTTCTGGCCG
CAGCATCCCC AGCAGTCGTG GGAGCAGTTG GAGCAACGGA TGACCGAGTA CGTGGCCGGT
GGCTATGCGT TCGATCTGGA AGACAACGAG CCGTCGATCC GCTGCGTGGC GGCGCCGATC
CGCGACGCGA GCAAGCGCAT CGTCGCGGCC ATCAGCATCG CCAGCACCGT GCCGTACATG
CCGCTGGAAA AAATGGCCGA GCTGATTCCC CTGATCAAAG GGGTCACGGC CCGGCTCTCG
GCGGAGCTTG GCTTGAAGGT CTGA
 
Protein sequence
MQEDAPKTAK DAAPTGTQTL LRGLGVVQAV ASGARDLKEI ARLIGTTRST THRLASCLVD 
ERYLRVVPQV GYLLGPKLIE LGFQAREELP LVTLAGPYLD ELSALTGDTV HLGIREGDEV
LYLLKNPGRN GPEMRSRVGH RMPLARTGIG KALMLDDAPQ DWQRLYDISL PAGGKSQFWP
QHPQQSWEQL EQRMTEYVAG GYAFDLEDNE PSIRCVAAPI RDASKRIVAA ISIASTVPYM
PLEKMAELIP LIKGVTARLS AELGLKV