Gene Pfl01_4115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4115 
Symbol 
ID3714957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4655942 
End bp4656745 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content62% 
IMG OID 
Productextracellular solute-binding protein 
Protein accessionYP_349843 
Protein GI77460336 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.147352 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGGGGC TGGCATTGTT GCCAGGTCTG TCGGTGGCGG CGGGCAAGTG CGAACGGCTG 
GTCGTCACCG GCAGCCCGGA TGCACCGCCG TACCTATGGC AGGATCCGCA AAACCCCAAA
CAACTGATGG GTGCCAGTGC CGACCTGTTG CAACAGGTGG CCAAGGAGTT GGGGATCAAA
GTCGATCTGC TGTACGCCGG CAAGCGTTCC CAGGCCCTCG ACGAAGTGCG CAGCGGGCGC
ATGGACATGC TGGCCGACGC GCCGCTGACC TTCAATGAGC TGGAAAACCT CGACTACATT
CACCCGCCGT TGCTGGAAAA CGATTACCTG GTGTGGACGC GCAAGGGCTC GACGCTGGTT
TATACCGAAG CCAGGGATCT GCACGGGCAT ACCGGCGGCT TGTCGGAAAA GTCTCGAATG
ACCCCGGCAT TCGGCACTTT CGCCGAGCAG CAATTGACCC TGACCCGTAC GGCAAACCTG
ACCCAGGCGT TTCAGAAACT TCTGCTGGGC GAGGTGGAAT ATGTACTCGC CGGTCGCTAC
TCGGGCATGG CGGCCGCGCA GGCATTGGGC ATGGCCAATG ACCTGCTGGC CTTTGAACAA
CCCATCGACC GCCCCGGTCT GTTCCTCGCG GTTTCGCACA ACTCGGCCTG CAACGATCCG
TGGTTGCGCG GACAGCTGGC CAAAAAGATG ACAGAATTGC CCGCGTCCGG CCTGACGGAA
GCCGCGCTGC AACGCAACAT CGAGCGCTGG AAGGCGCAGC AGCAACAGCC GCCGCAACCA
CCTGTCAGCG CCCCAAAACA GTAG
 
Protein sequence
MLGLALLPGL SVAAGKCERL VVTGSPDAPP YLWQDPQNPK QLMGASADLL QQVAKELGIK 
VDLLYAGKRS QALDEVRSGR MDMLADAPLT FNELENLDYI HPPLLENDYL VWTRKGSTLV
YTEARDLHGH TGGLSEKSRM TPAFGTFAEQ QLTLTRTANL TQAFQKLLLG EVEYVLAGRY
SGMAAAQALG MANDLLAFEQ PIDRPGLFLA VSHNSACNDP WLRGQLAKKM TELPASGLTE
AALQRNIERW KAQQQQPPQP PVSAPKQ