| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4055 |
|---|
| Symbol | |
|---|
| ID | 3714878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 4580392 |
|---|
| End bp | 4581315 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_349783 |
|---|
| Protein GI | 77460276 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.595328 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGTAA ACCCTCCTAA AGTTGCCGTG TTGCTGGCGG CCTACAACGG CATGCAATGG
ATCGAGGAGC AACTTTGCTC GATCCTTTCT CAGACAGGCG TTGATGTGAC TATTCACATC
AGCGTCGATC CCTCCAATGA TGGCACCGAA TCCTGGTGCG CATCGTTCGC CGCTCGGCAT
TCGAATGTCG TTCTGTTGCC GCCGGCAGGG CGTTTCGGAG GAGCATCGCG CAACTTCTTT
CGTTTGATGC GTGATGTCGA GCTGGGCGCT TACGATTATG TCGCTTTCGC CGATCAGGAC
GACATATGGC GTCTCGACAA GCTGGAGCGT GCCTGCCGTT TGTTGCGCCA GCAGAGCGCG
GACGCTTACT CGAGCAATGT GTCGGCTTTC TGGCCTGATG GTCGTACTCA CTTGCTGGAC
AAGGCTCAGG CTCAAGTCGA ATGGGATTAT CTGTTCGAGG CTGCCGGCCC CGGCTGCACT
TATGTTTTCA CTCGGTCATT GGCAGGCGCG ATCAAGGCGT CCATGGTTGC CAACTGGCAG
GCGTTGCAGG AGGTCAGTCT GCATGACTGG TATTGCTATG CATTTGCCCG AAGTCATCGG
TATTCATGGG TGATCGATCC TGAATCGACC CTGCAATACC GGCAGCATGA GCGCAATCAG
GTCGGTGCCA ACACTGGGCT CGGTTCATTG GTTGTCCGGT ACAAGAAAAT CCACAACGGT
TGGTGGTTTT CCCAGGCTCG ACTGATCGCC CTGCTGGTTG GTAAGGAGCA GGATCCTTTC
GTTCGTGGCT GGCAGGATTT GCGACGCTGG CAGTTACTGA AGCTGTCCCT GAGTGCCTGC
AGGTGCCGGC GCCGGGGCAG GGACAAGTTG TTCTTTTTCT TCGTGTGCTG GCTGACCGCG
CTGGTTGGAA ACAAGGCCGA ATGA
|
|---|
| Protein sequence | MPVNPPKVAV LLAAYNGMQW IEEQLCSILS QTGVDVTIHI SVDPSNDGTE SWCASFAARH
SNVVLLPPAG RFGGASRNFF RLMRDVELGA YDYVAFADQD DIWRLDKLER ACRLLRQQSA
DAYSSNVSAF WPDGRTHLLD KAQAQVEWDY LFEAAGPGCT YVFTRSLAGA IKASMVANWQ
ALQEVSLHDW YCYAFARSHR YSWVIDPEST LQYRQHERNQ VGANTGLGSL VVRYKKIHNG
WWFSQARLIA LLVGKEQDPF VRGWQDLRRW QLLKLSLSAC RCRRRGRDKL FFFFVCWLTA
LVGNKAE
|
|---|
| |