| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4046 |
|---|
| Symbol | |
|---|
| ID | 3713897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 4570517 |
|---|
| End bp | 4571599 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
|---|
| Protein accession | YP_349774 |
|---|
| Protein GI | 77460267 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.143061 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.565912 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTA CTGTTACCAA GCCGTTTGTT CCTCCTTTCG ACGAGTATGA AAAGTACCTG
CGAGGGGTTT GGGGCCGTGA ATGGTTCACC AACAATGGAC CATTGGTTAA CGAGCTTGAA
TTGAAGCTCA AGGAAAAGCT CGACGTCGAT CATCTGCTGT TTCTGAGTAA CGGTACCATT
GCCCTGCAAA TTGCAATTCG AGCCTTGGAA CTGAAAGGTG AAATCATCAC CACGCCTTTC
AGCTATGTAG CCACGACGTC CAGCATCGTC TGGGAAAATT GCACGCCGAT CATGGTGGAT
ATCTGCCAGG ACACGCTGAA TATCGATCCG GCGAAAATCG AACAAGCGAT CACTCCGCGA
ACCACGGCCA TTCTGGCTAC CCATGTGTTC GGCAATCCCT GCGATGTCGA AGCGATCGAT
GCGGTGGCCA AAAAGCATGG CTTGAAAGTC ATCTATGATG CCGCTCACGC CTTTGGTACG
ACCCATAAAG GGCGTTCCCT GCTGGCGTAC GGCGATATTG CAACTTGCAG TTTTCATGCA
ACCAAGCTTT TTCACACCAT CGAAGGTGGC GCGGTCGTTA CTTCCGATCC TGAAATCCTG
AAAAGCATGG CCATGAAGAG AAACTTCGGC CATACCTCGT TGACTGATTT CGGTGGCGTC
GGCGTCAATG GCAAGAACTC GGAAGTTCAC GCTGCAATGG GACTGACGAA TCTGAAGTAC
GTCGAAGAGA TCCTGGAGAA GCGCAAGGAA CTCTGCGACT ACTACAAAGA GAACCTGACT
GACCTGCCTG TCGAGTTCCA GAAGATTGCA GCGGATACGC AATACAATCA CTCCTACTTC
CCGGTGATCT TCGAAAGTGA GAAAGTGCTT CTGGCTGTCA TGGAAGTGCT CAACCTCCAC
AATATTTATC CTCGGCGCTA TTTTTACCCG TCGCTTTCCG AGCTTCCGTA CGTCGAGGGG
CAAAGTTCTC CGATCTCGGA GGATGTTTCC CGCCGCATCA TTTGCCTGCC GCTCTACCAC
ACCCTGTCGC GGGAAGAGAT CGACATGATC TGCCGACTCA TCAAGCGCTC TGTCAGGTAT
TGA
|
|---|
| Protein sequence | MNITVTKPFV PPFDEYEKYL RGVWGREWFT NNGPLVNELE LKLKEKLDVD HLLFLSNGTI
ALQIAIRALE LKGEIITTPF SYVATTSSIV WENCTPIMVD ICQDTLNIDP AKIEQAITPR
TTAILATHVF GNPCDVEAID AVAKKHGLKV IYDAAHAFGT THKGRSLLAY GDIATCSFHA
TKLFHTIEGG AVVTSDPEIL KSMAMKRNFG HTSLTDFGGV GVNGKNSEVH AAMGLTNLKY
VEEILEKRKE LCDYYKENLT DLPVEFQKIA ADTQYNHSYF PVIFESEKVL LAVMEVLNLH
NIYPRRYFYP SLSELPYVEG QSSPISEDVS RRIICLPLYH TLSREEIDMI CRLIKRSVRY
|
|---|
| |