Gene Pfl01_4045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4045 
Symbol 
ID3713896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4569822 
End bp4570490 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content59% 
IMG OID 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_349773 
Protein GI77460266 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.950103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.545183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT ATTACGGAAT CATCGGTGCA GGAGGTTATG GCAGAGAGGT CATTCCCCTG 
GCGCGTGCTT CTCTTTCAGC ATCGCTTGCA GGCGGTGACG CGGAGCTGTT TTTCGTTGTT
GAGGGCGAGG GTTCGGCCGA AACGGTCAAT GGCTTTCCGG TGGTGAGCAT GGATGCGTTC
CTGGCGCTGT CCGGGGAGCG TTATTTCAGT ATCGCTATTG GTGCTTCCGA TGTCAGGGAG
CGTATCGCCC GGCTGTGCGA AGAACAGGGC GCGATGCCTT TTTCCGTGAT TGCTCAAAAC
GTCGTGATCC TCGATGCCAA TGAAATCGGT GAGGGGGCGG TGCTGTCCCC GTTCGTGACC
GTGACGTCGA ACGCGAAGAT CGGCAAACAT TTTCACGCCA ACCTCTATTC CTATGTGGCG
CACGACTGTG TGGTCGGCGA CTTCGTGACC TTTGCCCCTG GCGTCAAATG TAACGGCAAT
GTCGTCATCG AAGATCATGC CTACATCGGT ACTGGCGCCG TGCTCAAGCA AGGCACGTCC
AAGCGACCCT TGACGATCGG GCGTGGGGCC ATTGTCGGGA TGGGGGCCGT GGTGACCAAG
AGTGTCGCGC CAGGCGACAC GGTCATCGGC AACCCCGCAC GGCCTCTGCG CGAGGCGCTG
CGCAAATGA
 
Protein sequence
MKKYYGIIGA GGYGREVIPL ARASLSASLA GGDAELFFVV EGEGSAETVN GFPVVSMDAF 
LALSGERYFS IAIGASDVRE RIARLCEEQG AMPFSVIAQN VVILDANEIG EGAVLSPFVT
VTSNAKIGKH FHANLYSYVA HDCVVGDFVT FAPGVKCNGN VVIEDHAYIG TGAVLKQGTS
KRPLTIGRGA IVGMGAVVTK SVAPGDTVIG NPARPLREAL RK