Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4045 |
Symbol | |
ID | 3713896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4569822 |
End bp | 4570490 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | hexapaptide repeat-containing transferase |
Protein accession | YP_349773 |
Protein GI | 77460266 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.950103 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.545183 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGT ATTACGGAAT CATCGGTGCA GGAGGTTATG GCAGAGAGGT CATTCCCCTG GCGCGTGCTT CTCTTTCAGC ATCGCTTGCA GGCGGTGACG CGGAGCTGTT TTTCGTTGTT GAGGGCGAGG GTTCGGCCGA AACGGTCAAT GGCTTTCCGG TGGTGAGCAT GGATGCGTTC CTGGCGCTGT CCGGGGAGCG TTATTTCAGT ATCGCTATTG GTGCTTCCGA TGTCAGGGAG CGTATCGCCC GGCTGTGCGA AGAACAGGGC GCGATGCCTT TTTCCGTGAT TGCTCAAAAC GTCGTGATCC TCGATGCCAA TGAAATCGGT GAGGGGGCGG TGCTGTCCCC GTTCGTGACC GTGACGTCGA ACGCGAAGAT CGGCAAACAT TTTCACGCCA ACCTCTATTC CTATGTGGCG CACGACTGTG TGGTCGGCGA CTTCGTGACC TTTGCCCCTG GCGTCAAATG TAACGGCAAT GTCGTCATCG AAGATCATGC CTACATCGGT ACTGGCGCCG TGCTCAAGCA AGGCACGTCC AAGCGACCCT TGACGATCGG GCGTGGGGCC ATTGTCGGGA TGGGGGCCGT GGTGACCAAG AGTGTCGCGC CAGGCGACAC GGTCATCGGC AACCCCGCAC GGCCTCTGCG CGAGGCGCTG CGCAAATGA
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Protein sequence | MKKYYGIIGA GGYGREVIPL ARASLSASLA GGDAELFFVV EGEGSAETVN GFPVVSMDAF LALSGERYFS IAIGASDVRE RIARLCEEQG AMPFSVIAQN VVILDANEIG EGAVLSPFVT VTSNAKIGKH FHANLYSYVA HDCVVGDFVT FAPGVKCNGN VVIEDHAYIG TGAVLKQGTS KRPLTIGRGA IVGMGAVVTK SVAPGDTVIG NPARPLREAL RK
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