Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4037 |
Symbol | |
ID | 3713888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4563981 |
End bp | 4564538 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | TetR family transcriptional regulator |
Protein accession | YP_349765 |
Protein GI | 77460258 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0431559 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.887396 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTACT CGCAGGATCA TAAAGCCCAG ACCCATCAAC GCATCATCAA GGAAGCGTCC GAGCGGTTTC GCAAGGACGG CATTGGTGCG ACCGGCCTGC AGCCGTTGAT GAAAGCACTG GGCCTGACGC ACGGCGGTTT CTACTCGCAC TTCAAGTCCA AGGACGAACT CGTTGAAAAG GCATTGCAAG CCGCCGGCGA TCAGGTTGCG GGGTTATGTG CCGAACTCTT CGCCCAGGAA AAACCGCTGG AAGCTTTTAT CGACACTTAC CTGTCCGAAT GGCATCAGAC CACGCCCGAC GAAGGCTGCC CGTTGCTGAC CATTTCGTCG GAACTGGGGT TGCGCGGCCA GCCTAGCCCG ACCAGCGATG CAGTGCTCAA GGCTCGCCTC GACCAGATCG AAGGCACCCT TGAAGGCGAG AGCACCGCCG AGCGCAGCGT CGTCATCATG GCGACACTGG TCGGGGCGCT CCTGCTGTCA CGCAGTGTCG CGGATGCCGG GTTGGCGCAA CGCATCCTGG ACGTCACCCG CGAACACCTC AAACGCTCGG AAGACTAA
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Protein sequence | MRYSQDHKAQ THQRIIKEAS ERFRKDGIGA TGLQPLMKAL GLTHGGFYSH FKSKDELVEK ALQAAGDQVA GLCAELFAQE KPLEAFIDTY LSEWHQTTPD EGCPLLTISS ELGLRGQPSP TSDAVLKARL DQIEGTLEGE STAERSVVIM ATLVGALLLS RSVADAGLAQ RILDVTREHL KRSED
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