Gene Pfl01_3976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3976 
Symbol 
ID3714002 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4503280 
End bp4506222 
Gene Length2943 bp 
Protein Length980 aa 
Translation table11 
GC content62% 
IMG OID 
Productmetal dependent phosphohydrolase, HD region 
Protein accessionYP_349704 
Protein GI77460197 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.777517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGCC CACTGCGCCC GGAACAACGC CGGTTTCCGC TGCATGTGCA CATCAGCGTC 
ATGTTCACCT TTTTGCTTTT GCTCACCGGG GTGGTGCTGG GTCTGTTCAA CTATCGGCAG
ACCACGCAGA TCATCCTGTC GAGCAGCGAA AAGCTGTTCA ACCGCATCGA GCAGGATGTG
CGCCTCGATC TGCAGGCCAC CTATGCACCG ATCAGACACC TGCTGAGCCT GCTGGCGGAC
AATCCCGCCG CCCGCTCTTC CGGCCTCGAA CCACGCCTGG CGCTGCTCAA GCCGTTCAGC
CAGTCCCTGA CGGACAATCC GGATCTGGCC TCGCTGTACC TGGGGTATGG CAACGGCGAC
TTCTTCATGG TTCGTCCTTT GCGCACGCCG GCGCTGAAAA CCCTGCTCAA GGCACCGGAC
GCAGCGGCGT TTCAGGTCTG GAGCATCGAA CATGACGCCA GCGGTCAGGC GCATTCGCAG
TCGCTGTTCT TCGACCAGGC ACTGTCCCCG GTCGGCCGGC AGGACAACCC CGACGATCCT
TATGATCCCC GCAGCCGAGC GTGGTACATC AACGCACGGC AGCAGACCGA ACAGATCACT
ACCGAACCCT ACGTCTTTTT TTCCACCCAT AACGTCGGCA CGACGCTGGC CCGGCGCAGC
GGTGATGACG CAGTGATCGG CGCCGACCTG ACCCTTGATG CACTCTCCGC AACCCTGATC
AAACACGTGG TGACGCCGGC CACGGAAATT GTCCTGTTCG ATGCCGATGG CAACGCCGTG
GCCTACCCCG ACAGCAGCCG GCTGATCGTC GATGACCGAA CGGCGCGTCT GGCCAAGGCT
GCCGACTTGA GCCCCGCCCT TAACGCCTTG TTGTCCGGCC ATCAGGGCAA TCGACTCAAG
GCCGACGGCC GGCTATGGAT CGTCGCCCGC AGCCAGTTGC AGGAAGGCGG GCCGAAAGGT
TTGCAAATGG CGTTGCTGGT GCCGGAGGAC GAGTTGCTGG TCGACGCCTA TCGCATGCGC
TGGCAGGGCG CGTTGATCAC GCTGGCTACT CTGCTGCTAT GCCTGCCGCT CGGGTGGCTG
ATCTCGCGAA TTCTGGTCAA ACCGCTACAC GCACTGGTCA AGGAAGCCGA TGCGATCCGC
AGTTTCGATT TCAATTTTCC CGTGACCCGT CGATCGCTGG TACTGGAGAT TGACCAGTTG
AGCCTGTCGA TGGCGCGCAT GAAGGACACC CTGGCCAGCT TCTTTCGGAT CACCGACAGC
CTGACTGCTG AAACCCGCTT CGAACCGCTG CTGCAGCGGG CCCTGTTCGA GACCGTGCAG
ATCGCCCAGG CTCAGGCGGG CCTGATCTAT CTGCGGGAAA ACGACGGCAA TCGCATGGAG
CCCTACGGAC TGGTGGTCGA TGGCGCCTCT CAAGCCCTGA CCGCGTTCGA CATTCAGGGA
CGCAACCTTG ACGCGACTCA GGGGCCCGAA TGGTTTCGGC AATTGGCGAG CGCCGACACA
GTCGTGAGCA ATCTGGGCTT CGAACAGGCC ACCGATCTGC GCAAAGTGCT GCTGGCCATG
GCGTCACCGA GGGTTCATCT GATCGGTATC CGTTTGCATA ACCGGCACAA CGAAACCGTC
GGCCTGCTGG TGCTGCTGAT CAATGACAGC GGCACGGCAA GTGATCTGGA AAAGCTGCGG
CCCGACCGCA TCGCCTTCCT GCAAGCAGTG TCCGGGGCGG CGGCGGTGAG TATCGAGAGC
CAGCGCCTGC AAGCCCGGCA GAAACAACTG CTGGACGCGT TCATTCAATT GCTGGCCGGC
GCCATCGATG CCAAGAGCCC TTATACCGGC GGACATTGTC AGCGCGTGCC GGAACTGACC
CTGATGCTCG CCCAGGCCGC TGCAGCCAGT CAGGCGCCGG CCTTCAGCGC TTACCAGCCG
AACGAAGATG AATGGGAGGC CTTGCACATC GCCGCCTGGC TACACGATTG CGGCAAAGTC
ACGACCCCGG AATACGTGGT CGACAAAGCC ACCAAACTGG AAACCCTGAA CGATCGCCTG
CACGAAATCC GCACCCGCTT CGAAGTGCTC AAGCGCGACG CCTGGGTCAG CTACTGGCAA
GCCCTGGCCA TGGGCGGCGA AGAGCGGCAA CTGGCCGATC TGCGCGACGC AACCCTGACA
GCGCTGGATG ATGATTTTGC ATTCGTCGCC CACTGCAATC TGGGCAGTGA AGCGATGGCC
GAGGCCGACC TGCAACGTCT GCAAGGCATC GCCCGACGTA CCTGGACGCG CACGCTGGAT
GATCGGCTGG GCCTGTCATG GGAAGAGAAC CGGCGTCAGG CACGCACCCC GGCACCGCCC
TTGCCGGTCA CCGAACCGTT GCTGGCAGAC AAGCCGGAGC ATCTGCTGGA ACGCGCCGAA
GGCGAGTTGA TTCCGGAGAA CAATCCGTGG GGATTCAAGC TCGACGTGCC GCCCTACAAA
TACAATCGCG GCGAGCTGTA CAACCTGAGC ATCCCCCGGG GCACGCTGAC CCGCGAAGAA
CGCTACATCA TCAACCACCA CATGGTGCAG ACGATCCTGA TGCTCAGTCA TCTGCCCTTC
CCCGGGCATT TGAACAGCGT CGCGGAAATC GCCGGCGGGC ATCACGAAAA GATGGATGGC
ACCGGTTATC CCAAGCGCCT GAAACGCGAG GACATGAGCC TGCCGGCGCG CATGATAGCG
ATTGCCGATA TATTCGAAGC CCTGACCGCC GCCGACCGCC CGTACAAGAA GGCCAAGTCC
CTCAGTGAGG CGCTGGGGAT CATGGCCACC ATGTGCCGTG AAGCGCACAT CGATGCCGAG
TTGTTCGAGC TGTTCATCCG CGATGGCGTG TATCTGCAGT ACGCCACGCG GTTTCTCGAT
CCACGGCAGA TCGATGCCGT GGATCCGGCG GCCGTGCTGC TCAAGGCGGG CCTGGCGGCG
TGA
 
Protein sequence
MPSPLRPEQR RFPLHVHISV MFTFLLLLTG VVLGLFNYRQ TTQIILSSSE KLFNRIEQDV 
RLDLQATYAP IRHLLSLLAD NPAARSSGLE PRLALLKPFS QSLTDNPDLA SLYLGYGNGD
FFMVRPLRTP ALKTLLKAPD AAAFQVWSIE HDASGQAHSQ SLFFDQALSP VGRQDNPDDP
YDPRSRAWYI NARQQTEQIT TEPYVFFSTH NVGTTLARRS GDDAVIGADL TLDALSATLI
KHVVTPATEI VLFDADGNAV AYPDSSRLIV DDRTARLAKA ADLSPALNAL LSGHQGNRLK
ADGRLWIVAR SQLQEGGPKG LQMALLVPED ELLVDAYRMR WQGALITLAT LLLCLPLGWL
ISRILVKPLH ALVKEADAIR SFDFNFPVTR RSLVLEIDQL SLSMARMKDT LASFFRITDS
LTAETRFEPL LQRALFETVQ IAQAQAGLIY LRENDGNRME PYGLVVDGAS QALTAFDIQG
RNLDATQGPE WFRQLASADT VVSNLGFEQA TDLRKVLLAM ASPRVHLIGI RLHNRHNETV
GLLVLLINDS GTASDLEKLR PDRIAFLQAV SGAAAVSIES QRLQARQKQL LDAFIQLLAG
AIDAKSPYTG GHCQRVPELT LMLAQAAAAS QAPAFSAYQP NEDEWEALHI AAWLHDCGKV
TTPEYVVDKA TKLETLNDRL HEIRTRFEVL KRDAWVSYWQ ALAMGGEERQ LADLRDATLT
ALDDDFAFVA HCNLGSEAMA EADLQRLQGI ARRTWTRTLD DRLGLSWEEN RRQARTPAPP
LPVTEPLLAD KPEHLLERAE GELIPENNPW GFKLDVPPYK YNRGELYNLS IPRGTLTREE
RYIINHHMVQ TILMLSHLPF PGHLNSVAEI AGGHHEKMDG TGYPKRLKRE DMSLPARMIA
IADIFEALTA ADRPYKKAKS LSEALGIMAT MCREAHIDAE LFELFIRDGV YLQYATRFLD
PRQIDAVDPA AVLLKAGLAA