Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3934 |
Symbol | |
ID | 3712571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4447874 |
End bp | 4449199 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | periplasmic sensor Signal transduction histidine kinase |
Protein accession | YP_349662 |
Protein GI | 77460155 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.753143 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATGAGCC TGCGCCTGCG CCTGAGCCTG ACCCTCGGCG CCGCATTCGC GCTGATCTGG GCATTGGCGG CCGCCTGGAT GCTCAGCGAC CTGCGCAACC AGATGATGTT TTCCCTCGAC CAGCGCCTGG TGGCGTCGGC GCGGATGGTC GCCGGGTTGC TGGAACAATT GCCGGCTGTC CCGAGCAAAG GCGAGGGCAC TCATTTCAGC GCCGAGCAGT TGAACATTCC CGGCGGCATG GCCTGTCAGG TCAGCTCGCT GCGCGGGGAA ATCCTCGCTC GCAGCCACAA CAATCCGGAA CAGGCGCTGG AAGCCCAGAA GATGGGCTTC CACGATCAAA TGATCGACGG TGCCCCATGG CGCAGCTTCA CCCTGGCCCG GGGCGATGTG CGTATTACCA CCGCCGACCG GGTGATCGAG CGCGAAGCCC TGAACATGTC GATCCTGCTG GCGGCCTCGG TGCCGGTCGG CGTGGCGCTG CTTGGCTGCC TGTGCCTGTT GTGGCTGGGG ATCGGCCAGG GGTTGGCGCC GCTCAACCGC TTGCGTGAAG CCTTGATGCG TCGCAACGCG GATTCGCTTG AGCCGTTGCA GTTGCAGTCA TTCCCCAGCG AACTGAAACC GCTGCTGGAA ACCCAGAACC AATTGTTTCA GCGCATCGGC AAGACCATCG AGCGCGAGCG TCGCCTGACC GGCGATGCCG CCCACGAACT GCGCAGCCCG CTGACGGCGA TCAAGACCCA CCTGCAAGTG GCGCGCATGA CCGATGGCAG CGCCCGCGAT CAGTCTCTGG CCCGAGCCGA GGAGGGTGCC GACCGCCTGC ATCGGACCCT TGAGCAGTTA CTGTTGCTGG CGCGGGTCGA AGGCAGTCTG TCGTTCGACG ACGGTGTGCA GTGCAGCGCC GAGCAGGTAG CGAAACTGGC GATTCAGGAC TCGGCCAGCG ACCAGCGTCA GCGCATCAGG CTGCATCTGC CTGAACACTT GTCCGCTGCG CCGCTGCAAA TGCCGGCGGT GCTGTCGATC GCGGCCCTGC GCAACCTGTT GGACAACGCT CTGCGTCACA CGCCGACGGA CGGCGCGGTG GACCTGAGCC TGGAAACCAG CGCCAATCGC GTCCGTTTTG TGGTGCGCGA CCATGGGCCG GGAATCGCCC CTGACGATCT GCAACACCTG ACCCAGCGCT TCTGGCGCAA CGGCCAGAGC ACCGGCTGCG GACTGGGGCT GGCGATTGTC CAGGCGATCG TTCAGCGCTG CGCCTGCACC CTGCATTTCG ACAGCCGTCC GGATGGTTTG CGGGTCGAGC TGACCATGCC GCTGCAACCG GTCTGA
|
Protein sequence | MMSLRLRLSL TLGAAFALIW ALAAAWMLSD LRNQMMFSLD QRLVASARMV AGLLEQLPAV PSKGEGTHFS AEQLNIPGGM ACQVSSLRGE ILARSHNNPE QALEAQKMGF HDQMIDGAPW RSFTLARGDV RITTADRVIE REALNMSILL AASVPVGVAL LGCLCLLWLG IGQGLAPLNR LREALMRRNA DSLEPLQLQS FPSELKPLLE TQNQLFQRIG KTIERERRLT GDAAHELRSP LTAIKTHLQV ARMTDGSARD QSLARAEEGA DRLHRTLEQL LLLARVEGSL SFDDGVQCSA EQVAKLAIQD SASDQRQRIR LHLPEHLSAA PLQMPAVLSI AALRNLLDNA LRHTPTDGAV DLSLETSANR VRFVVRDHGP GIAPDDLQHL TQRFWRNGQS TGCGLGLAIV QAIVQRCACT LHFDSRPDGL RVELTMPLQP V
|
| |