Gene Pfl01_3934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3934 
Symbol 
ID3712571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4447874 
End bp4449199 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content65% 
IMG OID 
Productperiplasmic sensor Signal transduction histidine kinase 
Protein accessionYP_349662 
Protein GI77460155 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.753143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGAGCC TGCGCCTGCG CCTGAGCCTG ACCCTCGGCG CCGCATTCGC GCTGATCTGG 
GCATTGGCGG CCGCCTGGAT GCTCAGCGAC CTGCGCAACC AGATGATGTT TTCCCTCGAC
CAGCGCCTGG TGGCGTCGGC GCGGATGGTC GCCGGGTTGC TGGAACAATT GCCGGCTGTC
CCGAGCAAAG GCGAGGGCAC TCATTTCAGC GCCGAGCAGT TGAACATTCC CGGCGGCATG
GCCTGTCAGG TCAGCTCGCT GCGCGGGGAA ATCCTCGCTC GCAGCCACAA CAATCCGGAA
CAGGCGCTGG AAGCCCAGAA GATGGGCTTC CACGATCAAA TGATCGACGG TGCCCCATGG
CGCAGCTTCA CCCTGGCCCG GGGCGATGTG CGTATTACCA CCGCCGACCG GGTGATCGAG
CGCGAAGCCC TGAACATGTC GATCCTGCTG GCGGCCTCGG TGCCGGTCGG CGTGGCGCTG
CTTGGCTGCC TGTGCCTGTT GTGGCTGGGG ATCGGCCAGG GGTTGGCGCC GCTCAACCGC
TTGCGTGAAG CCTTGATGCG TCGCAACGCG GATTCGCTTG AGCCGTTGCA GTTGCAGTCA
TTCCCCAGCG AACTGAAACC GCTGCTGGAA ACCCAGAACC AATTGTTTCA GCGCATCGGC
AAGACCATCG AGCGCGAGCG TCGCCTGACC GGCGATGCCG CCCACGAACT GCGCAGCCCG
CTGACGGCGA TCAAGACCCA CCTGCAAGTG GCGCGCATGA CCGATGGCAG CGCCCGCGAT
CAGTCTCTGG CCCGAGCCGA GGAGGGTGCC GACCGCCTGC ATCGGACCCT TGAGCAGTTA
CTGTTGCTGG CGCGGGTCGA AGGCAGTCTG TCGTTCGACG ACGGTGTGCA GTGCAGCGCC
GAGCAGGTAG CGAAACTGGC GATTCAGGAC TCGGCCAGCG ACCAGCGTCA GCGCATCAGG
CTGCATCTGC CTGAACACTT GTCCGCTGCG CCGCTGCAAA TGCCGGCGGT GCTGTCGATC
GCGGCCCTGC GCAACCTGTT GGACAACGCT CTGCGTCACA CGCCGACGGA CGGCGCGGTG
GACCTGAGCC TGGAAACCAG CGCCAATCGC GTCCGTTTTG TGGTGCGCGA CCATGGGCCG
GGAATCGCCC CTGACGATCT GCAACACCTG ACCCAGCGCT TCTGGCGCAA CGGCCAGAGC
ACCGGCTGCG GACTGGGGCT GGCGATTGTC CAGGCGATCG TTCAGCGCTG CGCCTGCACC
CTGCATTTCG ACAGCCGTCC GGATGGTTTG CGGGTCGAGC TGACCATGCC GCTGCAACCG
GTCTGA
 
Protein sequence
MMSLRLRLSL TLGAAFALIW ALAAAWMLSD LRNQMMFSLD QRLVASARMV AGLLEQLPAV 
PSKGEGTHFS AEQLNIPGGM ACQVSSLRGE ILARSHNNPE QALEAQKMGF HDQMIDGAPW
RSFTLARGDV RITTADRVIE REALNMSILL AASVPVGVAL LGCLCLLWLG IGQGLAPLNR
LREALMRRNA DSLEPLQLQS FPSELKPLLE TQNQLFQRIG KTIERERRLT GDAAHELRSP
LTAIKTHLQV ARMTDGSARD QSLARAEEGA DRLHRTLEQL LLLARVEGSL SFDDGVQCSA
EQVAKLAIQD SASDQRQRIR LHLPEHLSAA PLQMPAVLSI AALRNLLDNA LRHTPTDGAV
DLSLETSANR VRFVVRDHGP GIAPDDLQHL TQRFWRNGQS TGCGLGLAIV QAIVQRCACT
LHFDSRPDGL RVELTMPLQP V