| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3928 |
|---|
| Symbol | |
|---|
| ID | 3712565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 4442805 |
|---|
| End bp | 4443548 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter-like |
|---|
| Protein accession | YP_349656 |
|---|
| Protein GI | 77460149 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.576596 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCTC AGGAAAACCT GTCGATAGCC AGCAGCGGCC CGACCCTGGA TTTCGCTGAC
ATCAGCCTGA CCCTCGGCCG CACGACGATT CTGGACAAGG TCACCTTCCA GGTGCAGCCC
GGCAGCGTGC ATGCGCTGGT CGGTCCCAAC GGCGGCGGCA AGAGTTCGCT GATCAAGACC
CTGCTCGGGC AGATGCCCCA TCAGGGCCGG CTCAGCCTGC AATGGCCCGG CGAGCCCGGC
ACCATCGGTT ACGTGCCGCA GGCGCTGGAG TTCGATCGGG GCCTGCCGAT GACCGTCGAC
GATTTCATGG CTGCCATGTG CCAGCGCCGC CCGGCCTTTC TCGGCCTGAG CAAACGCTAC
GCCGGCGCTA TCGGTGATGC GCTGGAGCGG GTCGGTATGC AGGACAAGCG CAAGCGCCGG
ATGGGTGCGC TGTCCGGTGG CGAACGCCAG CGGGTATTGC TCGCCCAGGG CCTGATTCCG
GCGCCGCAAC TGCTGGTGCT GGATGAACCG ATGTCGGCCC TCGACGAAGC CGGAATCCAG
GTGTTCGAGC GTTTGCTGGG TGACTGGCGC GCGGCGGGCA TCACCGTGCT GTGGATCGAG
CACGATCTGG AAGCGGTCGG GCGTCTGGCC AATCGCGTCA CCGGCCTCAA CCGCCGGGTG
CTGTTCGACG CCTCGCCGCA ACAGGCCCTG ACCCCGGAAC GTCTGCTGAC CCTGTTCTCG
ACCCATCCAC GGAGCGCTGC CTGA
|
|---|
| Protein sequence | MTAQENLSIA SSGPTLDFAD ISLTLGRTTI LDKVTFQVQP GSVHALVGPN GGGKSSLIKT
LLGQMPHQGR LSLQWPGEPG TIGYVPQALE FDRGLPMTVD DFMAAMCQRR PAFLGLSKRY
AGAIGDALER VGMQDKRKRR MGALSGGERQ RVLLAQGLIP APQLLVLDEP MSALDEAGIQ
VFERLLGDWR AAGITVLWIE HDLEAVGRLA NRVTGLNRRV LFDASPQQAL TPERLLTLFS
THPRSAA
|
|---|
| |