Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3927 |
Symbol | |
ID | 3712564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4441879 |
End bp | 4442808 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | periplasmic solute binding protein |
Protein accession | YP_349655 |
Protein GI | 77460148 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.51869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAGTT CATCTCAACG CCGTCCTTTC CTGCGCCTGC TGCTGATCGG CCTGTGCGCC AGCCTGCTGA GCCCGCTGGC CAGCGCCGAT CAGGCCAAGC GCCTGCGCAT CGGCATCACC CTGCATCCTT ATTACAGCTA CGTGGCGAAC ATCGTCGGCG ACAGGGCCGA GGTCGTGCCG CTGATTCCCG CCGGCTTCAA CCCGCACGCC TACGAGCCGC GCGCCGAAGA CATCAAGCGC ATCAGCGGGC TGGATGTGAT CGTGCTCAAC GGGGTTGGCC ATGACGACTT CGCCGACCGC ATGATCGCCG CCAGCGAAAC GCCGAACATC AAGACCATCG AAGCCAACGA AAACGTGCCG TTGCTGGCCG CCACCGGGGT TGCCGCGCGC GGTGCCGGCA AAGTGGTGAA CCCGCACACG TTCCTGTCGA TCAGCGCCTC GATTGCCCAG GTCAACAACA TCGCCCGGGA GCTGGGCAAG CTCGACCCGG ACAACGCCAA GACCTACACC CAGAACGCCC GCGCCTATGG CAAACGCCTG CGGCAGATGC GCGCCGACGC CCTGGCCAAG CTGACCCAGG CACCGAACGC CGAACTGCGA GTGGCCACAG TGCACGCCGC TTACGACTAC CTGCTGCGCG AGTTCGGTCT GGAAGTCACC GCCGTGGTCG AGCCGGCCCA CGGCATCGAG CCGAGCCCGA GCCAGTTGAA GAAAACCATC GATCAACTGC GGGAACTGGA CGTGAAAGTG ATCTTCTCCG AAATGGACTT CCCGTCCACT TACGTCGAAA CCATCCAGCG TGAATCCGGT GTGAAGTTGT ACCCGCTGTC GCACATTTCC TACGGCGAAT ACACCGCCGA CAAGTACGAA AAGGAAATGA CCGGCAACCT CAACACCGTG GTTCGGGCGA TTCAGGAGTC CGGCGCATGA
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Protein sequence | MPSSSQRRPF LRLLLIGLCA SLLSPLASAD QAKRLRIGIT LHPYYSYVAN IVGDRAEVVP LIPAGFNPHA YEPRAEDIKR ISGLDVIVLN GVGHDDFADR MIAASETPNI KTIEANENVP LLAATGVAAR GAGKVVNPHT FLSISASIAQ VNNIARELGK LDPDNAKTYT QNARAYGKRL RQMRADALAK LTQAPNAELR VATVHAAYDY LLREFGLEVT AVVEPAHGIE PSPSQLKKTI DQLRELDVKV IFSEMDFPST YVETIQRESG VKLYPLSHIS YGEYTADKYE KEMTGNLNTV VRAIQESGA
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