Gene Pfl01_3927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3927 
Symbol 
ID3712564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4441879 
End bp4442808 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content63% 
IMG OID 
Productperiplasmic solute binding protein 
Protein accessionYP_349655 
Protein GI77460148 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.51869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAGTT CATCTCAACG CCGTCCTTTC CTGCGCCTGC TGCTGATCGG CCTGTGCGCC 
AGCCTGCTGA GCCCGCTGGC CAGCGCCGAT CAGGCCAAGC GCCTGCGCAT CGGCATCACC
CTGCATCCTT ATTACAGCTA CGTGGCGAAC ATCGTCGGCG ACAGGGCCGA GGTCGTGCCG
CTGATTCCCG CCGGCTTCAA CCCGCACGCC TACGAGCCGC GCGCCGAAGA CATCAAGCGC
ATCAGCGGGC TGGATGTGAT CGTGCTCAAC GGGGTTGGCC ATGACGACTT CGCCGACCGC
ATGATCGCCG CCAGCGAAAC GCCGAACATC AAGACCATCG AAGCCAACGA AAACGTGCCG
TTGCTGGCCG CCACCGGGGT TGCCGCGCGC GGTGCCGGCA AAGTGGTGAA CCCGCACACG
TTCCTGTCGA TCAGCGCCTC GATTGCCCAG GTCAACAACA TCGCCCGGGA GCTGGGCAAG
CTCGACCCGG ACAACGCCAA GACCTACACC CAGAACGCCC GCGCCTATGG CAAACGCCTG
CGGCAGATGC GCGCCGACGC CCTGGCCAAG CTGACCCAGG CACCGAACGC CGAACTGCGA
GTGGCCACAG TGCACGCCGC TTACGACTAC CTGCTGCGCG AGTTCGGTCT GGAAGTCACC
GCCGTGGTCG AGCCGGCCCA CGGCATCGAG CCGAGCCCGA GCCAGTTGAA GAAAACCATC
GATCAACTGC GGGAACTGGA CGTGAAAGTG ATCTTCTCCG AAATGGACTT CCCGTCCACT
TACGTCGAAA CCATCCAGCG TGAATCCGGT GTGAAGTTGT ACCCGCTGTC GCACATTTCC
TACGGCGAAT ACACCGCCGA CAAGTACGAA AAGGAAATGA CCGGCAACCT CAACACCGTG
GTTCGGGCGA TTCAGGAGTC CGGCGCATGA
 
Protein sequence
MPSSSQRRPF LRLLLIGLCA SLLSPLASAD QAKRLRIGIT LHPYYSYVAN IVGDRAEVVP 
LIPAGFNPHA YEPRAEDIKR ISGLDVIVLN GVGHDDFADR MIAASETPNI KTIEANENVP
LLAATGVAAR GAGKVVNPHT FLSISASIAQ VNNIARELGK LDPDNAKTYT QNARAYGKRL
RQMRADALAK LTQAPNAELR VATVHAAYDY LLREFGLEVT AVVEPAHGIE PSPSQLKKTI
DQLRELDVKV IFSEMDFPST YVETIQRESG VKLYPLSHIS YGEYTADKYE KEMTGNLNTV
VRAIQESGA