Gene Pfl01_3856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3856 
Symbol 
ID3712286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4356915 
End bp4358255 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content62% 
IMG OID 
Productheavy metal sensor Signal transduction histidine Kinases (STHK) 
Protein accessionYP_349584 
Protein GI77460077 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.228266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.918767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGAC TGTCCTTGAG CGGCCGATTG GTGCTGTTGT TCGCCGGCTG CACCGCAGTG 
GTTTCGCTGG TCGCCGGGGT GGTGTTCAAT CGGGCCAGCG AAGGCCACTT CATCGAACTC
GACCAGCAAT TGCTCGAAGG AAAACTGCTC AGCGTGCGTC AGACGCTGCG CAGCGGTAGC
GACGCCGCGC ACATCACCGA TGAATTGAGC CAACAGGGCG ATGTTTCGTT GCGTATCAGC
AGCTCTGAGG GGCAGCGCTG GTTCGGTCGC TCGTTGCATA CCCCGGCGAA TCTGCCGCAA
CAGCCCGGCC TGGCCACCAT CAACGACAAC GGCACCGACT ATCGCCTGCT CAACGCCGCG
CTTGAACCGG GAAAACCCGA TTCCCCGCAA TTGACCTTGC TGCTGGACAT CACCCACCAC
CAGCACTTCC TGCAACGCAT GCAGCATCTG ATCTGGCTGA CCGTCGGCCT GTCGGCGCTG
GCCACTGCGC TGCTCGGCGC CTGGGCTGCC CGCAGCGGTC TTCGCCCGTT ACGCCGCATG
AGTGCGGTCG CCCGGGGGAT TTCGGCGCAA TCGCTGAATG CCCGACTGCC GGACGCACGG
ATGCCTGCAG AACTCGCGGA ATTGGCCCAC AGCTTCAACG CCATGCTCGG ACGCCTCGAT
GACTCCTTTC AGCGGCTGTC AGCGTTTTCC GCCGACATCG CCCATGAACT GCGCACCCCA
TTGTCAAACC TGCTGACTCA AACTCAGGTC ACCCTGACCC GCCCTCGCCC CCTCGAAGAC
TATCGCGAGG CACTGCACAG CAACCTCGAA GAGCTGCAAT GGATGGCGCA GTTGGTGAAC
GACATGCTTT ATCTGGCCAA GGCTGACCAC GGCTTGCTGG TGCCCAAGCG TGAACCGCTG
GAGCTGGCGG AAGAAGCCGA TGCGTTGCTG GAGTTTTTTG CGCCGCTGGC CGAAGACGCT
CAGGTCAGCC TCAGCCGTGA CGGTGCGGGG CGGTTCGAGG GTGATCGCGC GATGTTGCGT
CGGGCGCTGT CGAATCTGCT GGATAACGCG TTGCGCTTTA CCCCGGCCGC CGGCGAAGTG
CGTGTAAAGG TGGTCGAGCA GGCGAAATTC TTGAGCGTGA CTGTGGAGAA CAGTGGTGAG
GGGATTTCTG TCGAGTTGTT GCCGCGCTTG TTCGACCGCT TCTACCGGGC GGATCCGGCG
CGCCAGGAAG GCAGCAGCGA GCATGCGGGA TTGGGGCTGG CGATCACTCA GTCGATCATC
CGGGCCCATG GCGGGCAGAT TCATTGCGAA TCGGCTCAGG GCTGGACGCG GTTTGTGATT
GAGTTGCCGA AAAACGATTG A
 
Protein sequence
MRRLSLSGRL VLLFAGCTAV VSLVAGVVFN RASEGHFIEL DQQLLEGKLL SVRQTLRSGS 
DAAHITDELS QQGDVSLRIS SSEGQRWFGR SLHTPANLPQ QPGLATINDN GTDYRLLNAA
LEPGKPDSPQ LTLLLDITHH QHFLQRMQHL IWLTVGLSAL ATALLGAWAA RSGLRPLRRM
SAVARGISAQ SLNARLPDAR MPAELAELAH SFNAMLGRLD DSFQRLSAFS ADIAHELRTP
LSNLLTQTQV TLTRPRPLED YREALHSNLE ELQWMAQLVN DMLYLAKADH GLLVPKREPL
ELAEEADALL EFFAPLAEDA QVSLSRDGAG RFEGDRAMLR RALSNLLDNA LRFTPAAGEV
RVKVVEQAKF LSVTVENSGE GISVELLPRL FDRFYRADPA RQEGSSEHAG LGLAITQSII
RAHGGQIHCE SAQGWTRFVI ELPKND