| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3856 |
|---|
| Symbol | |
|---|
| ID | 3712286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 4356915 |
|---|
| End bp | 4358255 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | heavy metal sensor Signal transduction histidine Kinases (STHK) |
|---|
| Protein accession | YP_349584 |
|---|
| Protein GI | 77460077 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.228266 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.918767 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGAC TGTCCTTGAG CGGCCGATTG GTGCTGTTGT TCGCCGGCTG CACCGCAGTG
GTTTCGCTGG TCGCCGGGGT GGTGTTCAAT CGGGCCAGCG AAGGCCACTT CATCGAACTC
GACCAGCAAT TGCTCGAAGG AAAACTGCTC AGCGTGCGTC AGACGCTGCG CAGCGGTAGC
GACGCCGCGC ACATCACCGA TGAATTGAGC CAACAGGGCG ATGTTTCGTT GCGTATCAGC
AGCTCTGAGG GGCAGCGCTG GTTCGGTCGC TCGTTGCATA CCCCGGCGAA TCTGCCGCAA
CAGCCCGGCC TGGCCACCAT CAACGACAAC GGCACCGACT ATCGCCTGCT CAACGCCGCG
CTTGAACCGG GAAAACCCGA TTCCCCGCAA TTGACCTTGC TGCTGGACAT CACCCACCAC
CAGCACTTCC TGCAACGCAT GCAGCATCTG ATCTGGCTGA CCGTCGGCCT GTCGGCGCTG
GCCACTGCGC TGCTCGGCGC CTGGGCTGCC CGCAGCGGTC TTCGCCCGTT ACGCCGCATG
AGTGCGGTCG CCCGGGGGAT TTCGGCGCAA TCGCTGAATG CCCGACTGCC GGACGCACGG
ATGCCTGCAG AACTCGCGGA ATTGGCCCAC AGCTTCAACG CCATGCTCGG ACGCCTCGAT
GACTCCTTTC AGCGGCTGTC AGCGTTTTCC GCCGACATCG CCCATGAACT GCGCACCCCA
TTGTCAAACC TGCTGACTCA AACTCAGGTC ACCCTGACCC GCCCTCGCCC CCTCGAAGAC
TATCGCGAGG CACTGCACAG CAACCTCGAA GAGCTGCAAT GGATGGCGCA GTTGGTGAAC
GACATGCTTT ATCTGGCCAA GGCTGACCAC GGCTTGCTGG TGCCCAAGCG TGAACCGCTG
GAGCTGGCGG AAGAAGCCGA TGCGTTGCTG GAGTTTTTTG CGCCGCTGGC CGAAGACGCT
CAGGTCAGCC TCAGCCGTGA CGGTGCGGGG CGGTTCGAGG GTGATCGCGC GATGTTGCGT
CGGGCGCTGT CGAATCTGCT GGATAACGCG TTGCGCTTTA CCCCGGCCGC CGGCGAAGTG
CGTGTAAAGG TGGTCGAGCA GGCGAAATTC TTGAGCGTGA CTGTGGAGAA CAGTGGTGAG
GGGATTTCTG TCGAGTTGTT GCCGCGCTTG TTCGACCGCT TCTACCGGGC GGATCCGGCG
CGCCAGGAAG GCAGCAGCGA GCATGCGGGA TTGGGGCTGG CGATCACTCA GTCGATCATC
CGGGCCCATG GCGGGCAGAT TCATTGCGAA TCGGCTCAGG GCTGGACGCG GTTTGTGATT
GAGTTGCCGA AAAACGATTG A
|
|---|
| Protein sequence | MRRLSLSGRL VLLFAGCTAV VSLVAGVVFN RASEGHFIEL DQQLLEGKLL SVRQTLRSGS
DAAHITDELS QQGDVSLRIS SSEGQRWFGR SLHTPANLPQ QPGLATINDN GTDYRLLNAA
LEPGKPDSPQ LTLLLDITHH QHFLQRMQHL IWLTVGLSAL ATALLGAWAA RSGLRPLRRM
SAVARGISAQ SLNARLPDAR MPAELAELAH SFNAMLGRLD DSFQRLSAFS ADIAHELRTP
LSNLLTQTQV TLTRPRPLED YREALHSNLE ELQWMAQLVN DMLYLAKADH GLLVPKREPL
ELAEEADALL EFFAPLAEDA QVSLSRDGAG RFEGDRAMLR RALSNLLDNA LRFTPAAGEV
RVKVVEQAKF LSVTVENSGE GISVELLPRL FDRFYRADPA RQEGSSEHAG LGLAITQSII
RAHGGQIHCE SAQGWTRFVI ELPKND
|
|---|
| |