Gene Pfl01_3842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3842 
Symbol 
ID3714869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4343366 
End bp4344478 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349570 
Protein GI77460063 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.474352 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTAA CGATTTTGCA TGGCTACAGT GCCTCCAATT CCGGCGATGG TCTGCTGGTC 
GACCTGGCCA TTGCGCTGGT GCAGCGCAAC TTTGGCGAAG ACACCGCGAT CAGCGTCGTG
GCGTCCGATC CGGACTCTTT CAAGTACCTG CCGCACCCGC GTTTCGACGC GCCGGTGATG
GCGGCCAAGG GTTTGGGCCG AGTCAAACAG GCGGTGTTTC TCAATCAGTC CTACGCCGGG
TTGGCGGATC TGTTGAAGAG AACCGATCTG ATCGTCGGCG TCGGCGGCGG CTACATGCGC
TCGAAAAGTG CCTTCGAGCA CATCAAGCTG AAACTCGGCC ACGCCAAGCA ACTGGAAACC
GCGATCCTCA GCAAAGTGCC GTCGGTGTAC CTGCCGCAAA GCATCGGGCC GTTTCACGGC
GACAGCGACA AGATCGTCGG CCACTACGCC AGCGCCGATG CGGTGTTCGT GCGCGATAAC
CGTTCCTCGG CGCTGTTCGA TGCCTGTGAA AATGTCTACC GCGCGCCGGA CCTCGCGGTG
CAGGCGCTGG CCGGCAAGAT CCTCCAGCAA CCCAAGTTCA CCCGCTGCGC CTCGACGCCG
GCCACGGTGT GCGTGGTACT GCGCAAGCCC CCGGCGTGGA GCAAGGAAAA GAAGCTCGCC
TACGTGGCCA ACCTGAAGGT GCTGCTGCAG CGCTTGAAGA ACAAAAGCAA AGTGGTCTGC
GCCGTACAGA GCGCCGTGCG TGGTAACGAT GACGGCGCGT TCTATCGCGA ACTGGGCATC
ACCGAAGACT TGCTGCCGTT GAAGGCAACG CTGGCCAAAT ACCAACCGGA CCTGGTGATT
TCCGTACGCC TGCACGGCGC GATCGAATCG CTGCTCTCGG GCGTGCCGGC GTACCACATC
AGCTACGAAC GCAAAGGCTT CGGCGCCTAT CAGGACATGG GCGTCGAAGA CTGGGTGATC
AACGGCGGCG ACATCAATGT CGACACCATC ATCGACACGG TTTACGCGCC TGACGCGCTG
TCGAATTTCG GCAAACGCCT GACCGACACC TGCCGCGAGA TCGAGGCGAA AACCGTGGCC
ATGGACGACA TCATCAAGGG CGTCATTCGA TGA
 
Protein sequence
MNVTILHGYS ASNSGDGLLV DLAIALVQRN FGEDTAISVV ASDPDSFKYL PHPRFDAPVM 
AAKGLGRVKQ AVFLNQSYAG LADLLKRTDL IVGVGGGYMR SKSAFEHIKL KLGHAKQLET
AILSKVPSVY LPQSIGPFHG DSDKIVGHYA SADAVFVRDN RSSALFDACE NVYRAPDLAV
QALAGKILQQ PKFTRCASTP ATVCVVLRKP PAWSKEKKLA YVANLKVLLQ RLKNKSKVVC
AVQSAVRGND DGAFYRELGI TEDLLPLKAT LAKYQPDLVI SVRLHGAIES LLSGVPAYHI
SYERKGFGAY QDMGVEDWVI NGGDINVDTI IDTVYAPDAL SNFGKRLTDT CREIEAKTVA
MDDIIKGVIR