Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3802 |
Symbol | |
ID | 3714772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4304853 |
End bp | 4305560 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | haloacid dehalogenase, type II |
Protein accession | YP_349531 |
Protein GI | 77460024 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.303335 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTGA TCAACACACC GCGCCCGCAA TGGCTGACAT TCGATTGCTA CGGCACCTTG ATTCAATGGG ACGAAGGCCT GCGCGCCGTG GCTGAGCGGA TCCTCAGCGA GAAGGGCGAA CACCGGGTCG ACGCCGGGCG CCTGATCGAG GTTTACGACC GCCACGAACA TCGCCTGGAG CAGACGCCAC CGCATCGCTC GTTTCGCGAA CTCAGCACAC TCGGCCTGCA ACTGGCCCTG GAAGAACTGG GGCTGGCGAG TGCCAGCCAG GACAGCCAGC GCCTGGCCGC CGCGATCCCG CAGATGCCGC CGTTCCCCGA AGTCGTCGAG ACCCTCGCGC AGCTCAAGGC CAAGGGTTTC AAGCTGTGCA TCGTCTCCAA CACCGATGAC GACATCATCG CCGGCAACGT CGCTCAATTG GGTGGCCACA TAGACCGGGT GATCACCGCG CAGCAGGCCG GCGCCTACAA ACCGGCGCCG AGGCTGTTCG ACTACGCTCA TGAGCAATTG GGCGTCAGCC GCGATCAGGT GGTGCACATC TGCGCCAGCC CGATGCTCGA CCACACGGCG GCCCGCGACA TGCATTTTCG CTGCGTATGG ATTGATCGAG GGACCGGTCG TCAGTTGCTG CCGGACTATC GGCCCGACGC GATCCTCAAC ACGCTGGACG AAGTGCTGCC GCTGTTCGCA TCCCTTGGCT GGTCATAA
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Protein sequence | MTLINTPRPQ WLTFDCYGTL IQWDEGLRAV AERILSEKGE HRVDAGRLIE VYDRHEHRLE QTPPHRSFRE LSTLGLQLAL EELGLASASQ DSQRLAAAIP QMPPFPEVVE TLAQLKAKGF KLCIVSNTDD DIIAGNVAQL GGHIDRVITA QQAGAYKPAP RLFDYAHEQL GVSRDQVVHI CASPMLDHTA ARDMHFRCVW IDRGTGRQLL PDYRPDAILN TLDEVLPLFA SLGWS
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