Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3723 |
Symbol | ampC |
ID | 3714635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4209023 |
End bp | 4210189 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | beta-lactamase |
Protein accession | YP_349452 |
Protein GI | 77459945 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.111774 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCGA CCAACCTGAG AAAACTCAAG TCCTACAGCG CTTTCGGACT TTTCTTCAGC GCCGCCACCT GTCTGGCAGC CCCACAAACC GACGATCAGT TACAGGCGCT GGTCAAGGCC ACCGTGACCC CGGTCATGCA GCAACAGGAC ATCGCGGGAC TGGCCGTAGC CGTGACCGTC AATGGCAAGG CGCATTACTT TAACTACGGT GTCGCCGACA AAAGCACCGG GCAGGCAGTG AGTGAAAACA CCCTGTTCGA AATCGGCTCG GTAAGCAAAA CCTTCACCGC GATCCTCGCC GCCTACGCCC AGGCCAGCGG CAAACTGCAA CTCTCCGACA AGGCCAGCCA GCACTGGCCC GAACTGAAAG GCAGCGCCTT CGACCACATC AGCCTGCTGC AACTGGGCAC GTACAGCGCC GGGGGGCTGC CGCTGCAATT CCCGGATGCT GCGGATTCTG CCGACAAGAT GCTCGGCTAT TACCAACAGT GGAAACCGAC GTATCCGGCC GGCAGCCATC GCTTGTATTC CAACCCGAGC ATCGGCCTGT TCGGCTACCT GGCCGCAAAA AGCCTCGGTC AGCCGTTCAA TCAGGTCATG ACCGAAACCC TGCTGCCGAA ACTCGGGCTC AAGCACACCT TCCTGTCGGT GCCCGCGTCT GAACAAAAGC TCTACGCCCA AGGCTATGAC AAGAACAACA AACCGATTCG AGTCAGCCCC GGCGCCCTCG ATTCCGAAGC CTACGGCGTG AAAACCAGCG CCGCCGACCT GCTGCAATAC GTCCAGGCCA ACCTCGACAC CGCCAAACTC GAAACGCCTC TGCAAAAAGC CATCGCCCTC ACCCACACCG GATACTACAC CGTCGGCGAC ATGACCCAGG GCCTGGGCTG GGAACGCTAC GCCTACCCGA TCAGCCTCGA CCGCCTGCTG GACGGCAACT CGACGCCAAT GGCCATGGAG GCGCACAAGG TCAAATGGCT GAATCCGCCA CAGCCTGAAC CGGCGAACGT GCTGCTGAAC AAGACCGGTT CCACCGGGGG TTACGGCGCC TACGTCGCAT TCGTGCCGTC GAAGAAAGTC GGGATCGTGA TTCTGGCGAA CCGCAATTAT CCGAATGGAG AGCGGGTGAA GATTGCGCAC AGGATTCTGG GGGAATTGAC CCGGTAA
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Protein sequence | MSSTNLRKLK SYSAFGLFFS AATCLAAPQT DDQLQALVKA TVTPVMQQQD IAGLAVAVTV NGKAHYFNYG VADKSTGQAV SENTLFEIGS VSKTFTAILA AYAQASGKLQ LSDKASQHWP ELKGSAFDHI SLLQLGTYSA GGLPLQFPDA ADSADKMLGY YQQWKPTYPA GSHRLYSNPS IGLFGYLAAK SLGQPFNQVM TETLLPKLGL KHTFLSVPAS EQKLYAQGYD KNNKPIRVSP GALDSEAYGV KTSAADLLQY VQANLDTAKL ETPLQKAIAL THTGYYTVGD MTQGLGWERY AYPISLDRLL DGNSTPMAME AHKVKWLNPP QPEPANVLLN KTGSTGGYGA YVAFVPSKKV GIVILANRNY PNGERVKIAH RILGELTR
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