Gene Pfl01_3723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3723 
SymbolampC 
ID3714635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4209023 
End bp4210189 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content60% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_349452 
Protein GI77459945 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.111774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCGA CCAACCTGAG AAAACTCAAG TCCTACAGCG CTTTCGGACT TTTCTTCAGC 
GCCGCCACCT GTCTGGCAGC CCCACAAACC GACGATCAGT TACAGGCGCT GGTCAAGGCC
ACCGTGACCC CGGTCATGCA GCAACAGGAC ATCGCGGGAC TGGCCGTAGC CGTGACCGTC
AATGGCAAGG CGCATTACTT TAACTACGGT GTCGCCGACA AAAGCACCGG GCAGGCAGTG
AGTGAAAACA CCCTGTTCGA AATCGGCTCG GTAAGCAAAA CCTTCACCGC GATCCTCGCC
GCCTACGCCC AGGCCAGCGG CAAACTGCAA CTCTCCGACA AGGCCAGCCA GCACTGGCCC
GAACTGAAAG GCAGCGCCTT CGACCACATC AGCCTGCTGC AACTGGGCAC GTACAGCGCC
GGGGGGCTGC CGCTGCAATT CCCGGATGCT GCGGATTCTG CCGACAAGAT GCTCGGCTAT
TACCAACAGT GGAAACCGAC GTATCCGGCC GGCAGCCATC GCTTGTATTC CAACCCGAGC
ATCGGCCTGT TCGGCTACCT GGCCGCAAAA AGCCTCGGTC AGCCGTTCAA TCAGGTCATG
ACCGAAACCC TGCTGCCGAA ACTCGGGCTC AAGCACACCT TCCTGTCGGT GCCCGCGTCT
GAACAAAAGC TCTACGCCCA AGGCTATGAC AAGAACAACA AACCGATTCG AGTCAGCCCC
GGCGCCCTCG ATTCCGAAGC CTACGGCGTG AAAACCAGCG CCGCCGACCT GCTGCAATAC
GTCCAGGCCA ACCTCGACAC CGCCAAACTC GAAACGCCTC TGCAAAAAGC CATCGCCCTC
ACCCACACCG GATACTACAC CGTCGGCGAC ATGACCCAGG GCCTGGGCTG GGAACGCTAC
GCCTACCCGA TCAGCCTCGA CCGCCTGCTG GACGGCAACT CGACGCCAAT GGCCATGGAG
GCGCACAAGG TCAAATGGCT GAATCCGCCA CAGCCTGAAC CGGCGAACGT GCTGCTGAAC
AAGACCGGTT CCACCGGGGG TTACGGCGCC TACGTCGCAT TCGTGCCGTC GAAGAAAGTC
GGGATCGTGA TTCTGGCGAA CCGCAATTAT CCGAATGGAG AGCGGGTGAA GATTGCGCAC
AGGATTCTGG GGGAATTGAC CCGGTAA
 
Protein sequence
MSSTNLRKLK SYSAFGLFFS AATCLAAPQT DDQLQALVKA TVTPVMQQQD IAGLAVAVTV 
NGKAHYFNYG VADKSTGQAV SENTLFEIGS VSKTFTAILA AYAQASGKLQ LSDKASQHWP
ELKGSAFDHI SLLQLGTYSA GGLPLQFPDA ADSADKMLGY YQQWKPTYPA GSHRLYSNPS
IGLFGYLAAK SLGQPFNQVM TETLLPKLGL KHTFLSVPAS EQKLYAQGYD KNNKPIRVSP
GALDSEAYGV KTSAADLLQY VQANLDTAKL ETPLQKAIAL THTGYYTVGD MTQGLGWERY
AYPISLDRLL DGNSTPMAME AHKVKWLNPP QPEPANVLLN KTGSTGGYGA YVAFVPSKKV
GIVILANRNY PNGERVKIAH RILGELTR