Gene Pfl01_3713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3713 
SymbolaroE 
ID3714625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4199478 
End bp4200296 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content61% 
IMG OID 
Productshikimate 5-dehydrogenase 
Protein accessionYP_349442 
Protein GI77459935 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.606604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATGA ACCCCAACAA AGACACCCAA TTGTGCATGT CCCTGTCTGG GCGTCCCGGG 
AATTTCGGTC TGCGTTTTCA TAACCATTTG TATGAACAAC TGGGCCTGAA TTTCTACTAC
AAGGCATTCA GCAGCCAGGA CCTGCCCGGT GCGGTCGGCG GGATCCGCGC ACTGGGGATT
CGCGGTTGCG GCGTGTCGAT GCCGTTCAAG GAAGCCAGCA TTGCGCTGGT CGATGAGCTG
GATGCGTCGG CGGCAGCGAT TCAGTCGATC AACACCATCG TCAACACCAA CGGCCATCTC
AAGGCCTACA ACACCGATTA CATTGCCATC GCCCAGTTGC TGGAAACCCA CGCGGTGCCC
AAGGACACGA CTTTCGCGCT GCGCGGCAGC GGCGGTATGG CCAAGGCGGT GGCCAGTGCC
TTGCGCGATG ACGGTTACAA AAACGGTTTG ATCGTCGCCC GCAACGAGCG CGCCGGCCGT
GCGCTGGCGG ATTCTTTGGG TTATCGCTGG CAGGCAGAAC TGGGTGACGA GCGCCCGCAG
ATGCTGATCA ACGTCACGCC GGTGGGGATG GACGGTGGCC CGGAAGCAGG GCAGCTTTCC
TTTGACGTGG ATGTGATCAA GTCTGCCGAC ACCGTGTTCG ATGTGGTGGC GATCCCCTCG
GAAACCCCGC TGATCGTGCG CGGTCGTGCC GAAGGCAAAA AAGTGATCAC CGGGCTGGAA
GTGATCGCGA TCCAGGCGCT GGAGCAGTTC GTGCTGTACA CCGGCGTGCG GCCGACGGTC
GAGCAGTTCG ATGCGGCGGT GGCGTTTGCC CGCAGTTGA
 
Protein sequence
MQMNPNKDTQ LCMSLSGRPG NFGLRFHNHL YEQLGLNFYY KAFSSQDLPG AVGGIRALGI 
RGCGVSMPFK EASIALVDEL DASAAAIQSI NTIVNTNGHL KAYNTDYIAI AQLLETHAVP
KDTTFALRGS GGMAKAVASA LRDDGYKNGL IVARNERAGR ALADSLGYRW QAELGDERPQ
MLINVTPVGM DGGPEAGQLS FDVDVIKSAD TVFDVVAIPS ETPLIVRGRA EGKKVITGLE
VIAIQALEQF VLYTGVRPTV EQFDAAVAFA RS