Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3713 |
Symbol | aroE |
ID | 3714625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4199478 |
End bp | 4200296 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_349442 |
Protein GI | 77459935 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.606604 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATGA ACCCCAACAA AGACACCCAA TTGTGCATGT CCCTGTCTGG GCGTCCCGGG AATTTCGGTC TGCGTTTTCA TAACCATTTG TATGAACAAC TGGGCCTGAA TTTCTACTAC AAGGCATTCA GCAGCCAGGA CCTGCCCGGT GCGGTCGGCG GGATCCGCGC ACTGGGGATT CGCGGTTGCG GCGTGTCGAT GCCGTTCAAG GAAGCCAGCA TTGCGCTGGT CGATGAGCTG GATGCGTCGG CGGCAGCGAT TCAGTCGATC AACACCATCG TCAACACCAA CGGCCATCTC AAGGCCTACA ACACCGATTA CATTGCCATC GCCCAGTTGC TGGAAACCCA CGCGGTGCCC AAGGACACGA CTTTCGCGCT GCGCGGCAGC GGCGGTATGG CCAAGGCGGT GGCCAGTGCC TTGCGCGATG ACGGTTACAA AAACGGTTTG ATCGTCGCCC GCAACGAGCG CGCCGGCCGT GCGCTGGCGG ATTCTTTGGG TTATCGCTGG CAGGCAGAAC TGGGTGACGA GCGCCCGCAG ATGCTGATCA ACGTCACGCC GGTGGGGATG GACGGTGGCC CGGAAGCAGG GCAGCTTTCC TTTGACGTGG ATGTGATCAA GTCTGCCGAC ACCGTGTTCG ATGTGGTGGC GATCCCCTCG GAAACCCCGC TGATCGTGCG CGGTCGTGCC GAAGGCAAAA AAGTGATCAC CGGGCTGGAA GTGATCGCGA TCCAGGCGCT GGAGCAGTTC GTGCTGTACA CCGGCGTGCG GCCGACGGTC GAGCAGTTCG ATGCGGCGGT GGCGTTTGCC CGCAGTTGA
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Protein sequence | MQMNPNKDTQ LCMSLSGRPG NFGLRFHNHL YEQLGLNFYY KAFSSQDLPG AVGGIRALGI RGCGVSMPFK EASIALVDEL DASAAAIQSI NTIVNTNGHL KAYNTDYIAI AQLLETHAVP KDTTFALRGS GGMAKAVASA LRDDGYKNGL IVARNERAGR ALADSLGYRW QAELGDERPQ MLINVTPVGM DGGPEAGQLS FDVDVIKSAD TVFDVVAIPS ETPLIVRGRA EGKKVITGLE VIAIQALEQF VLYTGVRPTV EQFDAAVAFA RS
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