Gene Pfl01_3602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3602 
Symbol 
ID3714990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4071095 
End bp4072420 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content60% 
IMG OID 
Productisocitrate lyase 
Protein accessionYP_349331 
Protein GI77459824 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTGA CACGCGAACA GCAAATTGCA GCCCTTGAAA AAGACTGGGC TGAAAACCCG 
CGCTGGAAAG GCGTGACTCG CAATTACTCC GCTGCTGACG TCGTCCGTCT GCGTGGCTCG
GTTCAACCAG AGCACACCTT TGCAAAAATG GGCGCCGAAA AACTGTGGAA CCTGGTCACC
CAGGGTGCCA AGCCGTCCTT CCGCCCAGAG AAAGACTTCG TCAACTGCAT GGGCGCCCTG
ACCGGCGGCC AGGCTGTGCA GCAGGTCAAA GCCGGTATCC AGGCGATCTA CCTGTCGGGC
TGGCAAGTCG CTGCGGACAA CAACTCCGCT GAATCGATGT ACCCGGACCA GTCGCTGTAC
CCGGTGGACT CGGTTCCGAC CGTGGTCAAG CGCATCAACA ACTCGTTCCG TCGTGCCGAC
CAGATCCAGT GGAAAGCCGG CAAGAACCCG GGCGACGAAG GTTACATCGA CTACTTCGCG
CCAATCGTGG CTGACGCTGA AGCCGGGTTC GGCGGCGTAC TGAACGCCTA CGAGCTGATG
AAGAGCATGA TCGAAGCAGG CGCCGCCGGC GTTCACTTCG AAGACCAACT GGCTTCCGTG
AAGAAATGCG GCCACATGGG CGGCAAGGTG CTGGTTCCAA CCCAGGAAGC CGTGCAGAAG
CTGACCGCTG CCCGTCTGGC TGCCGACGTT GCCGGCGTAC CGACCATCAT CCTGGCCCGT
ACCGACGCCA ACGCTGCCGA CCTGCTGACT TCCGACTGCG ACCCGTACGA CCAGCCGTTC
GTGACTGGCA CCCGTACCCA GGAAGGTTTC TACAAGGTTC GTGCAGGTCT GGACCAGGCA
ATCGCCCGTG GCCTGGCCTA CGCGCCGTAC GCCGACCTGA TCTGGTGCGA AACCGCCAAA
CCGGACCTGG ACGAAGCCCG TCGTTTCGCT GAAGCGATCA AGAAGGAATA TCCGGACCAG
ATCCTCTCTT ACAACTGCTC GCCTTCCTTC AACTGGAAGA AAAACCTGGA CGACGCGACC
ATCGCCAAGT TCCAGCGCGA ACTGTCCGCC ATGGGTTACA AGCACCAGTT CATTACCCTG
GCCGGCATTC ACAACATGTG GCACAGCATG TTCAACCTGG CGCACGACTA CGCCCGCAAC
GACATGACTG CCTACGTGAA GCTGCAAGAG CAGGAATTCG CTGACGCCGC CAAGGGTTAC
ACCTTCGTGG CTCACCAGCA GGAAGTGGGC ACTGGCTACT TCGACGACAT GACCACCGTG
ATCCAGGGCG GCACGTCCTC GGTGACCGCG CTGACCGGTT CGACCGAAGA AGAACAGTTC
CACTGA
 
Protein sequence
MALTREQQIA ALEKDWAENP RWKGVTRNYS AADVVRLRGS VQPEHTFAKM GAEKLWNLVT 
QGAKPSFRPE KDFVNCMGAL TGGQAVQQVK AGIQAIYLSG WQVAADNNSA ESMYPDQSLY
PVDSVPTVVK RINNSFRRAD QIQWKAGKNP GDEGYIDYFA PIVADAEAGF GGVLNAYELM
KSMIEAGAAG VHFEDQLASV KKCGHMGGKV LVPTQEAVQK LTAARLAADV AGVPTIILAR
TDANAADLLT SDCDPYDQPF VTGTRTQEGF YKVRAGLDQA IARGLAYAPY ADLIWCETAK
PDLDEARRFA EAIKKEYPDQ ILSYNCSPSF NWKKNLDDAT IAKFQRELSA MGYKHQFITL
AGIHNMWHSM FNLAHDYARN DMTAYVKLQE QEFADAAKGY TFVAHQQEVG TGYFDDMTTV
IQGGTSSVTA LTGSTEEEQF H