| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3455 |
|---|
| Symbol | |
|---|
| ID | 3713580 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 3940418 |
|---|
| End bp | 3940945 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | tripartite ATP-independent periplasmic transporter DctQ |
|---|
| Protein accession | YP_349184 |
|---|
| Protein GI | 77459677 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.217295 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAATT TGCTGCTGCG CATCAATGAC CGGATCTACA TGGCCTGCAT CTGGGTCGCC
GGTCTGTCGG TGCTGACCAT TTCCCTGATC ATCCCCTGGG GCGTGTTCGC CCGTTACGTC
CTCGGCACCG GCTCGAGCTG GCCGGAGCCC ACCGCCATCC TGCTGATGAT GGTCTTCACT
TTCATCGGCG CCGCCGCCAG CTATCGCGCC GGCGCGCACA TGGCAGTCGC GATGGTCACC
GACCGCCTGC AACCGAAGAT GCGCCAAACC ATGAGCATCG TTTCGCAAGT GCTCATGGGC
ACCATCTGCC TGTTCATGAC CATCTGGGGC ACCAAGCTGT GCCTGTCGAC GTGGAACCAG
TTCATGAGCG CCCTGCCGAC ATTGCGGGTC GGCATCACTT ACATGCCGAT CCCGGTTGGC
GGTGCGCTGA CGCTGGTTTT CGTACTGGAA AAACTCTTGC TCGGCGATCA AAGCAATCGC
CGCGTGGTGC GATTCGACCT GGTTGAAGAA AACGAAGGGG CTGCCTGA
|
|---|
| Protein sequence | MKNLLLRIND RIYMACIWVA GLSVLTISLI IPWGVFARYV LGTGSSWPEP TAILLMMVFT
FIGAAASYRA GAHMAVAMVT DRLQPKMRQT MSIVSQVLMG TICLFMTIWG TKLCLSTWNQ
FMSALPTLRV GITYMPIPVG GALTLVFVLE KLLLGDQSNR RVVRFDLVEE NEGAA
|
|---|
| |