Gene Pfl01_3404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3404 
Symbol 
ID3713392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3883639 
End bp3884970 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349133 
Protein GI77459626 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTGC TACCTGACGC GGTCTGCTGG CATGAAGGCA TGCAATTGCT GCCCCAGCAT 
TTTCAGTTAC AGGGCCTGCG GGCCGAGGCG CTCGGCGCGC ATCTGGCTCA GGCGTGCAAT
CCGTGGTTTT TCGGCGTCAG CCACATGGAG TTCGATCCGT CGGCGATGAG CGCCGGCGTG
GTGCGGGTGC TGTCGTTGCA AGGGACGATG CCGGACGGTC TGCCGGTCAA TCTGCAAGTC
GGCGTCGACC CGACGCTGGA GCTGGACGTC GCTGCCGCGA TCGACGCCAC GGACGATGCG
ACGGTGACGG TCTATCTGGC GATCAGTCCG CTGTGGCGCG CCGGTCAGTT GCTGCCGCTC
AAGGGGCGTC TGCAATCGGT GGTCGGCGAG GCGTTACCGG ATCTCACCAG CGGCGAATTT
CCTGAATCGA TCACGGTGTG GCGTCCCAAT CCACGGCTGT GTACGCAACT CAACAAAGCC
GATTCAATCT GCCTGCCGCT GCTGAAAATC CGCAAGGAGG GCGGCGGTTT CCTGCCGTTG
CCGTACACGC CGCCGACACC GGTCCTGCTG CCAGAATCCC CATTGGGTCG GCGGGTGGTC
GGGCTCTGCG CGAGGGCGCG GGAGAAGTGC CTGTTTCTCG GCGGACGATT GCGCCAGGCG
CAGCAGGCCG GCAATCAGGA TGACGCGCTG GAAATCCGTC GGCAGATGAC GGCGTTGTGG
GCGCGCTTGC CGGAGGTGGA AGGGGCGCTG ATCAGCCGTG TCGCTCATCC GCAAAGCATT
TATGTGCAAT TGCTGGGACT CGCCGGTGCG TGGTCGGCGC TGGATCCGCT GGCGGGTGTG
CCGGCTTTTG CGCCACTGGA TTTTCTCGAA TTGCAGCGCG GTTACGATCC GCTGCTCGAC
TGGCTGGAAA ACACCCTGGA ACTGATCCGC GCCGGTTACC GCAGCATCGC GTTCGAGCGC
GGTGAGCAGA GCTTTTCCAT TCAGTTGCCG GACGAGCAAC CGAGCCAGCG TCTGGTCATC
GGCCTGCGCA TGCCCAACGG TGCCAGCGAG CAGGCGGCCG GCGAATGGCT GCGCGGCGCG
ATCATCGCTT CGGCGCCGCA CATTGCCTTG CTCAGCCGTC AACGGATGAG CGGTCTGACG
CATCAGGCCA TGAGCCGCGG CGAACAGGTG GCCTACAGCG TCGGCGACGA CACCCGGCTG
TTCGTGGTGA CCGCCGAAGG CAGCTGGTTC GACGCGCAAC TGCCGCTGAT GATCGCCGCG
CCGGCCACCA AGCTGACCAG CAGCCCGTGG CAAGTGGTGT TGTTTGTCGC CCAGAACAGT
GAACGTGCCT GA
 
Protein sequence
MSLLPDAVCW HEGMQLLPQH FQLQGLRAEA LGAHLAQACN PWFFGVSHME FDPSAMSAGV 
VRVLSLQGTM PDGLPVNLQV GVDPTLELDV AAAIDATDDA TVTVYLAISP LWRAGQLLPL
KGRLQSVVGE ALPDLTSGEF PESITVWRPN PRLCTQLNKA DSICLPLLKI RKEGGGFLPL
PYTPPTPVLL PESPLGRRVV GLCARAREKC LFLGGRLRQA QQAGNQDDAL EIRRQMTALW
ARLPEVEGAL ISRVAHPQSI YVQLLGLAGA WSALDPLAGV PAFAPLDFLE LQRGYDPLLD
WLENTLELIR AGYRSIAFER GEQSFSIQLP DEQPSQRLVI GLRMPNGASE QAAGEWLRGA
IIASAPHIAL LSRQRMSGLT HQAMSRGEQV AYSVGDDTRL FVVTAEGSWF DAQLPLMIAA
PATKLTSSPW QVVLFVAQNS ERA