Gene Pfl01_3362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3362 
Symbol 
ID3713293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3837795 
End bp3839009 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content61% 
IMG OID 
Productmajor facilitator transporter 
Protein accessionYP_349091 
Protein GI77459584 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAGG ATTACCTGGC TTTTTTCATC TCGCTGTTCC TCTCGCGGCT GGCGGATCAG 
ATCCTGTTGT TCATCGTGCC GCTGGTGGTA TTCCAGACCA CCAACAGCGC GTCTTGGGCG
GGGCTTGCAT TCTTCGTCGA GTCGCTGCCG CGCTTTCTCG CGTTTCCGTT GTGCGGGGCC
CTGTGCGACA AGTTCTCGCC CATCAGAATT CTGCACATCA GTCAGGTCTA CCGGGCGCTG
CTCTGCGTGT TGGCGGTAGG GCTTTATGCC GTCTTCGGCG GTATCGCGTG GCTTGTGGTG
CTGTCTGCGC TGTGCGGCGT GCTGACCACT CAGGGCATCA TGGCCCGCGA AGTGCTGATG
CCGCATATTT TCCAGCACTA CAGCTACACC AAAACCCTGT CCTACTCGCA GATAGCCGAC
CAGACCGGAC TGGTTCTGGG CCCCTTGGTG GCGGCATTGC TGCTGGAGGT TTCGGCCTGG
CACTGGGTGG TGCTGTGGGT GGCCGGGCTG TTCTTGCTGG CCGACCTGAG CATGCGGGTG
TGGCAACGTT TCAGTCGTAT CACCCTCGAG GTGTTCGAGC AGCATCAGGA CATCTGGCTG
CAGCCTCTGC GCATCGCGTT CAGGCATATC CGCGAACGGG CGGAGCTGAA AAAGATCATC
GCCCTGGCGG TCGGGGTCAA CCTGATTGTC GGGGTCACTC TGGCCACTTC GGCGGCCATG
GTGCTCGGTC AATACAGCGC CGGCAAGGAC GACTACGCCG TGCTGCAAGC GGCTGGCGCG
GTGACCACCA TCGTGATTCT GTTTTTCCTC GCCCGGGTGG TGTTGCCGTT GCGCGTACTG
GGTGGGGTTG CCTGTTCGAT GCTTGCCGCC GGCGCCTTCA TCAGCGCCCT GAGCCCGAAC
CTGGCGGGTT ATGTGCTGGG TTTCCTGCTG ATCGTCGGCT TCGACAAGAT GTTCAACGTC
TACATGCGCA GCATTCGCCA GCGAGTCATT CCCCCCCAGG ACTTCGGCAA GACAGTGGGC
GTGATCACCC TGCTCAACAA CTTGTCGCAA CCGCTGGCCG GTCTGCTGGT CGCACTGCTC
GCCGCGCCAT TGGGGACACA ACGTGTGATT CTGATTCTGG CCGTGCTGGC GACGCTGCTG
GGCGTAGCGG CGCTCTGGTG GTTTGCCAGA GTCCGTAACG CCCCCGTCAC GTCGATTCTC
GAGACCGAGC AGTAA
 
Protein sequence
MRKDYLAFFI SLFLSRLADQ ILLFIVPLVV FQTTNSASWA GLAFFVESLP RFLAFPLCGA 
LCDKFSPIRI LHISQVYRAL LCVLAVGLYA VFGGIAWLVV LSALCGVLTT QGIMAREVLM
PHIFQHYSYT KTLSYSQIAD QTGLVLGPLV AALLLEVSAW HWVVLWVAGL FLLADLSMRV
WQRFSRITLE VFEQHQDIWL QPLRIAFRHI RERAELKKII ALAVGVNLIV GVTLATSAAM
VLGQYSAGKD DYAVLQAAGA VTTIVILFFL ARVVLPLRVL GGVACSMLAA GAFISALSPN
LAGYVLGFLL IVGFDKMFNV YMRSIRQRVI PPQDFGKTVG VITLLNNLSQ PLAGLLVALL
AAPLGTQRVI LILAVLATLL GVAALWWFAR VRNAPVTSIL ETEQ