Gene Pfl01_3350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3350 
Symbol 
ID3713281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3824533 
End bp3826014 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content64% 
IMG OID 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_349079 
Protein GI77459572 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTTG AACGTCAACG ATTCCAGGAA ACCCTGCGCA GCCATGCAGG GCGCAATGAC 
AACGCTTTGG CATTGTGGGG CGACACCCTG AAAGTCAGTT ACACGACGCT GTACGCCGAA
GTAATGTACC GCCAGCAACG CTTGCGCGAT GAAAACGTGA AGGTTATCGC CCTGGCGCTG
GACAACGGCG TCGAAGCCAT ACTCTGGGAT CTGGCGGCGT TGTTTGAAGG CTTGACGTGC
GTGACGCTGC CGCCGTTCTT CAGTCCGGCA CAACGTGCCC ATTGCCTGGA ACAAAGCCAG
GCCGAACGGG TGATCGCTGA ACCGGAGTTG GAGAGCGAAC TGCTCGCCGC CGGTTATGAA
CGACGCGGTG AATTCTGGTG CCGCGCTTTT GAAGGCCCGA ACCGCCTGCC AGTCGGCGCC
GCCAAACTGA CGTTTACCTC CGGCACCACC GGTACACCGA AGGGCGTGTG CCTGAGCGCC
GACAGTCTGC TGCGGGTCGC ACGGGAGCTG GAAGAGGCCA GCAAACCCAC GGCCCCCCAA
CATCACGTGG CGCTACTGCC GCTGGCGATC CTGCTGGAGA ACCTCGGCTG TTACGCCGCA
CTGTACGCCG GTGCGACGCT GAGCGTGCCG AGCCAGAAAA CCCTGGGCAT CCAGGGCGCC
AGCGGCGTCG ACCTGCCGCG CTTGCTCGGC TGTCTGGCCA GCCGGGCACC CGAGAGCCTG
ATTCTGGTGC CGCAATTGCT GCTGTTACTG GTCAGCGCTG CCGAACAGAA AGCCTTCGAT
CCGCAATCGC TGCGTTTTGC CGCCGTCGGT GGCGCACGGG TTTCCGAGGA TCTGCTGCAC
CGCGCGCAAC GGGTCGGCCT GCCGGTCTAC GAAGGCTACG GCCTGTCCGA GTGCGCCTCG
GTGGTCTGTC TCAACCGGCC CGGGGCTCGG CGTCCGGGGA GCGTCGGGCG GCCCCTGCCC
CATGTCGACG TGCGCCTGGC CGAAGACGGT GAGGTGTTGA TCAAAGGCTC GACCCTGCTC
GGCTACATTG GCGAACCCGC GTACAGCGAT GAGTGGTGGC CCAGCGGCGA TCTGGGCGAG
TTCGACCCGG AAGGTTTTCT CTACCTCAAG GGCCGCAAGA AGCATCAGTT CGTCACCAGT
TTCGGGCGCA ACGTCAACCC GGAATGGGTC GAATCCGAAC TGACCCAGCG TCATCACATC
GCTCAGGCCT TTGTGTATGG CGAAGCCTTG CCGCATAACC ACGCCCTGCT CTGGCCGCAC
CGTCCGGACT GCACCGATGC TCAGTTGGCG GCCGCCGTCG CCGCTGCCAA CGAGGCCTTG
CCCGATTACG CCCAGGTGCA TCACTGGACA CGTCTCAAAC AACCTTTCAC GGCCGCCAAC
GGCCTGCTCA CCGCCAACGG TCGCCCGCGC CGCGAGGCAA TCGTCGCGCA GTACCGCGCC
GTGCTTATCG AATCCGCCCT TTCCGAGGAA TCCGCACCAT GA
 
Protein sequence
MSLERQRFQE TLRSHAGRND NALALWGDTL KVSYTTLYAE VMYRQQRLRD ENVKVIALAL 
DNGVEAILWD LAALFEGLTC VTLPPFFSPA QRAHCLEQSQ AERVIAEPEL ESELLAAGYE
RRGEFWCRAF EGPNRLPVGA AKLTFTSGTT GTPKGVCLSA DSLLRVAREL EEASKPTAPQ
HHVALLPLAI LLENLGCYAA LYAGATLSVP SQKTLGIQGA SGVDLPRLLG CLASRAPESL
ILVPQLLLLL VSAAEQKAFD PQSLRFAAVG GARVSEDLLH RAQRVGLPVY EGYGLSECAS
VVCLNRPGAR RPGSVGRPLP HVDVRLAEDG EVLIKGSTLL GYIGEPAYSD EWWPSGDLGE
FDPEGFLYLK GRKKHQFVTS FGRNVNPEWV ESELTQRHHI AQAFVYGEAL PHNHALLWPH
RPDCTDAQLA AAVAAANEAL PDYAQVHHWT RLKQPFTAAN GLLTANGRPR REAIVAQYRA
VLIESALSEE SAP