| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3307 |
|---|
| Symbol | |
|---|
| ID | 3713181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 3787446 |
|---|
| End bp | 3788861 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_349036 |
|---|
| Protein GI | 77459529 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAA CCGATACGAC CGTACTGCGT CACGCCGACA TCCTGATTGT CGGCGGCGGC
CTCAGCGGCA CGATGCTGGC GGTGCAATTG CTGCGTTTGC CGGGGCGCAG AAAGATTCTG
GTGATCGAGC CCCGGGCCGA ACTGGGCCGG GGCGAAGCGT ACAGCGCGGT GGAACTGGGC
CACACGCTCA ACGGCAATGC GGCGCGGATG AGCGTCGATC CGGACAATGC CGATGACCTG
ACTCAATGGC TGACCGATCA CATCGCTGGC GGTGGCTGGC CGGAGTCGGA TCAGCAACAT
GTACCGGTCA GCGAACTGTT TCCACCTCGG GGTTTGTTCG GCGTGTATGT GCAGCAGCGT
CTGGCGGAGG CGCAGCAGGT GGGCGCCCAA CACGGTTCGA CGGTCGAGCA TGTGCGCGCC
GAAGTGGTCG ATGTTCAGGC TTCCGGCGAT TCCGTGCTGC TCACTTTGAG TGACGGCCAG
CCATTGCAGG GCGCTTTTGC AGTGCTGGCG ACCGGGATGT TCCCTGCGGC GCGCACCCCG
CAAAAACAAT CCAGTGGCCT CAACGCGGCG GCGCTGGATC CGTGGGATGT CGCGGCCATG
CGCCAGCTCG ATCCGCACTC GAGGGTGCTG ATCATCGGTT CCGGCCTGAC CATGGTCGAT
GCCGTGGTGT CGCTGCAGCA GGCCGGGCAT CGCGGGCCGA TCGAGGTGTT TTCCCGGCAC
GGGCTGTTGC CCCATGTGCG TCGGCAGCCG CCGGCGTGGG TGGACTTCCT CGCCGAGGAT
CACAGCATCC GCACGCCGCG CCAGTTACTG CGCGAATTGC GCCGGCATTG CCGCGACGCC
ATCGCCCAAG GCATCGACTG GCAGGCGCCG CTCGACACCG TGCGTGCGCA CATCGGTCGG
TTATGGAGTC AGGCCAGCGA TCTGCAGCGC CGGCAATTCG TGCGGCATGT GCGGCCGTGG
TGGGAAAGTC ATCACCATCG TTCACCGCCG CTGAGCGCGG AACTGGTCGA GCGTCTGCAC
CGGGAAGGGC GATTGCGCAT TCATGCTGCG TCCTACAAGG GTCTTGAATT GGCGTCGGAT
GGCGGGGTGA GTATCCGTAT TCGCCCTCGC GGCGAGGCCG AAACCCGCGT GGTGCAGGGC
GCGGCGTTGA TCAATTCCAG CGGCATCGAA TACGACTGGC GCCGGGTCGC GCGACCTTTG
CCGCAGCAGT TGCTGGCGCG CGGTCTGGTT CGTCCGGGGC CGCTGGCGCT GGGCATCGCA
GCCGCGGTGG ACGGCGCTGT GCTGGATGCC GAAGGCCGGG TTTCGCCCTG CCTGTTCGCC
ATGGGCCCGC CGTTGCGTGG CATGTGGTGG GAAAGCACCG CTGTCACCGA TGTGGCGTCG
CAGGCCAAGG CACTGGCCGC GCGACTGGTG CGCTGA
|
|---|
| Protein sequence | MTQTDTTVLR HADILIVGGG LSGTMLAVQL LRLPGRRKIL VIEPRAELGR GEAYSAVELG
HTLNGNAARM SVDPDNADDL TQWLTDHIAG GGWPESDQQH VPVSELFPPR GLFGVYVQQR
LAEAQQVGAQ HGSTVEHVRA EVVDVQASGD SVLLTLSDGQ PLQGAFAVLA TGMFPAARTP
QKQSSGLNAA ALDPWDVAAM RQLDPHSRVL IIGSGLTMVD AVVSLQQAGH RGPIEVFSRH
GLLPHVRRQP PAWVDFLAED HSIRTPRQLL RELRRHCRDA IAQGIDWQAP LDTVRAHIGR
LWSQASDLQR RQFVRHVRPW WESHHHRSPP LSAELVERLH REGRLRIHAA SYKGLELASD
GGVSIRIRPR GEAETRVVQG AALINSSGIE YDWRRVARPL PQQLLARGLV RPGPLALGIA
AAVDGAVLDA EGRVSPCLFA MGPPLRGMWW ESTAVTDVAS QAKALAARLV R
|
|---|
| |