Gene Pfl01_3296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3296 
Symbol 
ID3713170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3779690 
End bp3780370 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349025 
Protein GI77459518 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGGAA GACTGTCGCA ATACCGGGGC ATCCACGATT TCGTCGCGGT GCTGAGCATT 
CCCGATGCGC TGATCAATCA CGTCGGTGAC GCACCGCTGG CGCATTACAA TGCCGCGCCC
ACGACGTCAC TGGCGATCCT CCATCAGCAC CAACAACGGC TATACGCCGA CAATCTGCGC
TGGGGCTGGC GCCCGCACTG GGCGACGGAT CGCGCCGCGC CGATCAACGC GCGGGTGGAA
AAAGTCGCCC ACGGGCCGTT CTTTCGAGCG ATCTGGCGCC ATCGACTGAT CGTGCCCGTC
GACAACTGGT TCGAGTGGGT CGATGCACCC GACAAAAGCC GACAGCCCTG GCTGATTCGT
CGGGCCGATC ATCAACCGGT TTTCTGCGCC GCCATCGGCC AGTTTCCGAC ACCCGGAGAG
CCTCAACGGG ACGACGACGG CTTCGTCATC ATCACCGCCA ACAGCGAAGG TGGCCTGCTC
GATGTGCATG ACCGGCGCCC GATCGTTCTG CGCGCTGATC GGGTGCACGA ATGGCTCGAT
CCCGCCACGC CGACCGAGCG CGCCGAACAG ATGCTGCTGT TCGAAGCCGA ACCCAGCGAA
GCGTTCCACT GGCACAAAGT CGGCAAAGCG GTGGGCAGCT CCCGCAATCA GGGTGCGGAA
TTGATTGAAG CCGTAACGTA A
 
Protein sequence
MCGRLSQYRG IHDFVAVLSI PDALINHVGD APLAHYNAAP TTSLAILHQH QQRLYADNLR 
WGWRPHWATD RAAPINARVE KVAHGPFFRA IWRHRLIVPV DNWFEWVDAP DKSRQPWLIR
RADHQPVFCA AIGQFPTPGE PQRDDDGFVI ITANSEGGLL DVHDRRPIVL RADRVHEWLD
PATPTERAEQ MLLFEAEPSE AFHWHKVGKA VGSSRNQGAE LIEAVT