Gene Pfl01_3060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3060 
Symbol 
ID3712744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3501733 
End bp3502629 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348789 
Protein GI77459282 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.979021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0493517 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCA TGCTGATCGT GGGCTATTGC TACGGCATCC GCTCAGAGCG GCGGTTGTGC 
GAAGAGGCCC ATTTGAACCT GGCGTATTGT TGGTTCTGCC GGTTAAGCCT TGAAGATAAA
GTCCCCAACC ACGCGACTTT TTCCAAAAAT AGACACGGCC GTTTTCGGGA CAGCTATCTC
TTTCGCTGGC TGTTCAATGA AGTGCTGCGT CATTGCATGG ACGCAGGCTT GGTCAAAGGT
GAAGGCTTTG CCGTGGACGC CAGCATCATC AAAGCGGATG CCAGTCGGCA GCGCGGTGTA
CCGGGTGATG AACCGGTCAA CTGGAGCGAT CCGGCCCTGA GCACCCGCGC CGTGCGTGAG
TATCTTGAGG CCCTCGATGA AGAGGCTCTG GCCGAAACGC TACCGAAGCG CCTATCGCTG
ACTGCCCGCT GGACCGCAGC TCCAGGTGGC CCAGCGTTCT ACGCTTACTC CACGAATTAT
CTGATCGATA CCGAGCACGG CGTGATCATG GATGTGGAAC CCACACCGGC TCACCGAACC
GCAGAAGTCG AGAGCACCAC ATCGGCGACA CCGCTTACGG TACCGCGCCG ATGCTTGCCC
GGATGGTGGA GGAAAAATAC ATCGGGCCAC ATGTGCCGGT GTGGGACAAA ACTGAGCGCA
AGAACGACAG CTTTTCGAGT AACGATTTCA ACTGGAATGA AGAGGCCGAG GAATATCGCT
GCCCAGCCGG CAACGTATTA CGCAGCGAAT GGCGAGCCTT CAGAACGAGC GTTCGCACGT
CACCAAAGTC AACACCATCA TCTTCCGCTC CAGGCAGACC GACTGCGCGA CATGTCCGAT
GAAAGCCAAG TGTTGCCCGA ACACTCCGAT TCGCAAGATC GTCCGCAGCG TCCATGA
 
Protein sequence
MIRMLIVGYC YGIRSERRLC EEAHLNLAYC WFCRLSLEDK VPNHATFSKN RHGRFRDSYL 
FRWLFNEVLR HCMDAGLVKG EGFAVDASII KADASRQRGV PGDEPVNWSD PALSTRAVRE
YLEALDEEAL AETLPKRLSL TARWTAAPGG PAFYAYSTNY LIDTEHGVIM DVEPTPAHRT
AEVESTTSAT PLTVPRRCLP GWWRKNTSGH MCRCGTKLSA RTTAFRVTIS TGMKRPRNIA
AQPATYYAAN GEPSERAFAR HQSQHHHLPL QADRLRDMSD ESQVLPEHSD SQDRPQRP