Gene Pfl01_3054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3054 
Symbol 
ID3712738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3495996 
End bp3496868 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content65% 
IMG OID 
ProductUbiE/COQ5 methyltransferase 
Protein accessionYP_348783 
Protein GI77459276 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0198479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAGC AAAAAGCCTA TCAGGTCGCC GATTGGAATG GCGAAAGTGG AGAGTACTGG 
GCCGCCAACC AGGCCCGGCT CGACGCCATG TTTGCGGTAT TTGGCCAGGC CGCGATAGAA
GCCGCGGCGC CCGCCACCGG CGAACGCGTG CTTGACGTCG GTTGCGGCGC GGGCGCGTCG
AGTCTGGCTC TGGCCGCACG CGTCGGTGCG GGCGGACATG TGCTGGGCGT AGACATATCC
GAACCGCTAA TTGGACGAGC CCGCGAGCTT GCGCCGCAGG ATACGCCGGT CCTGTTCCAG
GTGGCCGACG CCAGTAACGC CGAGCTGCCC GAGGGCGCGT TTGACATCCT TTTCTCGCGT
TTCGGGGTGA TGTTCTTCGA CGATCCGACA GGGGCATTCG CCCATATGCG ACGCGCGCTC
CGACCGGGCG GGCGGGTCGC TTTCATCTGC TGGCGCGGCG TGGCCGAGAA CGATTGGGTA
CGCCTGCCGA TGGGCGCGAT CAGGGGCGTC GTCCCGCCGA TCGCAACGCT TGATCCCGAA
GCACCCGGAC CATTCTCGTT CGGTGACCGG GGGCGCGTGA CACGTATCCT GACGGATGCA
GGCTTTACCG ATATCACTTT TGCGCCGTTC GATGTGTCCA TCCCGTTCGG CGAAGGCGAG
ACTCGGGATG CTGCGATCGA CGACGCGGTA AGGATGGCGT TCGAGGGCGG CCCGCTGTCG
CTTGTGCTCG CACATCAAAG CGATGACATC CGCGCCCAAG CTTCAGCGGC GATTCGCGCC
GCTTTCGCCA GCCTCCCCGG CGAACGGTCG GTGATGATCG GCGGCGCGGC GTGGATCGTC
ATGGCAGGTA ATCCGGCAAC CAGCGCCTGT TAG
 
Protein sequence
MTEQKAYQVA DWNGESGEYW AANQARLDAM FAVFGQAAIE AAAPATGERV LDVGCGAGAS 
SLALAARVGA GGHVLGVDIS EPLIGRAREL APQDTPVLFQ VADASNAELP EGAFDILFSR
FGVMFFDDPT GAFAHMRRAL RPGGRVAFIC WRGVAENDWV RLPMGAIRGV VPPIATLDPE
APGPFSFGDR GRVTRILTDA GFTDITFAPF DVSIPFGEGE TRDAAIDDAV RMAFEGGPLS
LVLAHQSDDI RAQASAAIRA AFASLPGERS VMIGGAAWIV MAGNPATSAC