Gene Pfl01_3029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3029 
Symbol 
ID3712713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3465587 
End bp3467131 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content59% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348758 
Protein GI77459251 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATGA GCACCAACAG CTACCTGGAA TTTTACCTCT CCCTGCTGGC CTGGATCATC 
AACAACGGCC TCTGGAGCGT CCTGTCCGAT ACTGGGCTGT TTGCCGCGCC CTTCGGTGCA
ATCATCTTGC AGGAATGGTT GTCTGCTCGT CAGCAAGGCG CGGATGAAGG CAACAAGGGA
CTGCTCTCGG TGCCACGGAT CGAGAACCGG TTGTGGCTGG CCTACATCGT CGTCTTGTTC
GGTTGCGCCC CCGTCTTTCC GTTGAGTCTT GCATCAATGG CGTTCGACGA TGCGGCGAGC
CAGCGCTGCG GCGTGAGTGT GGCCAAGCCT GCGGAAACCG CCTGGGGGAC GACCTTCAAT
ACCATCGGCG AACGCTCTGC CAACGTGCCG ATCTGGTGGT TTCTGGTGCA TGCCTTGAGC
AAAGGTGTGA CTGCGGCGGC CACCGCCTCC ATCCCTTGCG CACCGGATAT CCGGCAAATG
CGCATGGAGA TCGACAGCTC GCGCATCGAC AGTCAGGTGC TGCTGCAGGA AGTCGCCGAC
TTCACTCGCG ACTGCTACGG CTATTCCCGT TCTCGGTTGT TTACCAATCG CCCGCAACTG
GACAAGTCAC AAAGTCACGA CGCATCCTGG ATCGGCTCAA GCTATTTTCT CGACACACCC
GGCTACTACG ACACCGATCG CTCACGAACG CCGCGAGTCA GTTGGCCGTA TGACGACAAC
CGCGATGTTT CCCTGCCGCG GCTGGAGAAT GGCGCGGGCT ACCCCACTTG CAAACAGTGG
TGGAGCGACA GCGGTGTCGG GTTGCGCGAG CGCTTGATCG AGCAAGTCGA TCCTTCGCTG
CTAACTCAGC TAAAAGGTTG GTTGACTGGC CGATCGAGCA ACGAGATCGA GGATGCCACC
CTGCGTGAGC TGGTCAGTCC GCGCCAGCAA TCGATGACCA TGTCGCCCGG ACAGGTGTAC
CAGGACTATG GCTCCAGCGC CCGTGGCGGC TCGATCAATC AGGGGCTCAA TAATCTGGCC
ACCAATACCG GGTTAGCACT GGGCTCCTTC AGCAACTTCC CGGCGCTGAA TGCGCTACGC
GCCGCCCTAC CGATGGTGCA GGCGTTCCTG ATCATGGGCA TCATCATCAG CTTGCCGCTG
ATTCTATTGG TCAGTACCTA CCAGTTGAAG ACCGTCATGA CGGTGACGTT CGCACTGTTC
ACACTGCATA TGCTGAGCTT CTGGTGGGAA CTGGCCCGCT GGGTCGACTC CAGCATGCTC
GATACCTTGT ACAACCAGGT TTCGGCGTCC AATCAGATGC TGTTGTCGCT GCCCACATCC
GGACTTATGG ATGGGACGGT CACCGCGCAG GTGATCGAGT ACGTGATGGG GGCAATGTTC
GTCGTGCTTC CGATGTTGTT TTTGGCTGCA ATGAGCTGGG CAGGATATAG CGTTGGCTCA
ATTGCCGACG GCATGCTTAG CAAAGGAGCA GCTCAAGCGC AGGACGCTGG TGCAAGGGGC
GCTGGAGCTC TGATGTCTGC TGGAAAGGCC TTAAGGAAGG GGTGA
 
Protein sequence
MLMSTNSYLE FYLSLLAWII NNGLWSVLSD TGLFAAPFGA IILQEWLSAR QQGADEGNKG 
LLSVPRIENR LWLAYIVVLF GCAPVFPLSL ASMAFDDAAS QRCGVSVAKP AETAWGTTFN
TIGERSANVP IWWFLVHALS KGVTAAATAS IPCAPDIRQM RMEIDSSRID SQVLLQEVAD
FTRDCYGYSR SRLFTNRPQL DKSQSHDASW IGSSYFLDTP GYYDTDRSRT PRVSWPYDDN
RDVSLPRLEN GAGYPTCKQW WSDSGVGLRE RLIEQVDPSL LTQLKGWLTG RSSNEIEDAT
LRELVSPRQQ SMTMSPGQVY QDYGSSARGG SINQGLNNLA TNTGLALGSF SNFPALNALR
AALPMVQAFL IMGIIISLPL ILLVSTYQLK TVMTVTFALF TLHMLSFWWE LARWVDSSML
DTLYNQVSAS NQMLLSLPTS GLMDGTVTAQ VIEYVMGAMF VVLPMLFLAA MSWAGYSVGS
IADGMLSKGA AQAQDAGARG AGALMSAGKA LRKG