Gene Pfl01_3012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3012 
Symbol 
ID3712696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3450757 
End bp3452862 
Gene Length2106 bp 
Protein Length701 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348741 
Protein GI77459234 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.658628 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGC ATGCAATGGA GTCCAAGCTC CGGCCAGCGG TGGAGCTATA CACCGTAGCG 
ATCTGCATCG CTGCCGCGGT GTTGTGCGTG TACTCGCCCT GGGCTGTGGC CCTGTCACCC
GAGATCGGTC TGGTTGCAGC GCTGGCCTAT GCCCTGTTCG GCCTTATCCG GCTGCGACAA
GCCTGGGAGG TGCTGCGTTA TCGGCGCAAT ATCCGTCGGC TGCCCCGCTA CGGGCTGACC
AGTCGGCAGA TTCCGGTCAG CCGCAAGCGT CTGTTCATGG GCCGTGGCTT TCGCTGGACC
CGCCTGCACA CCCAACGTTT GGTTGAGGCC CAGGATCCGG CGGTCGCCCA CTATGTCGAG
CAACCGACCC GTTACCGTCT GGCCCGAGGA CTCGAACGCC GCCTGGAACA TGCACCGTTT
CCGTTCTCGA CACTGGCCCG TGCCACCGCC TGGGACAGCG CCTTCAATCC GTTGCGCCCT
TTGCCCCAAG TAGGTGGCTC GCCGCTGTTG CATGGGGTGG AGCCTGATGA AACAGAAGTC
AGTCTACCGC TGGGCGAACG GGTCGGTCAC ACCCTGGTGC TCGGCACTAC CCGTGTCGGC
AAGACGCGAC TCGCCGAGGT GTATATCACC CAGGACATTC ATCGCATCGA ACATGAAGTG
GTCATAGTCT TCGATCCGAA GGGCGATGCC GACCTGCTCA AACGGATGTA CGTTGAAGCC
AAGCGGGCAG GTCGAGATAA GGAGTTTTAT GTTTTCCATC TAGGCTGGCC GGAGATCTCC
GCTCGATACA ATGCGGTGGG ACGCTTCGGG CGTATCTCGG AAGTGGCGTC ACGCATCGCC
GGGCAGCTCA GCGGCGAAGG TAACTCCGCG GCCTTTCGCG AGTTTGCCTG GCGTTTCGTC
AACATCATCG CCCGTGCCCT GATCGAGTTA GGCCGGCGTC CGGACTACTT GCAGATCCAA
CGGCATGTGG TCAACATCGA CGCACTGTTC ATCGAGTACG CCCAGCAGTT TTTCGCCAAG
ACCGACCCGA AGGCGTGGGA GGTGATCGTT CAGCTCGAAG GCAAGCTCAC CGAAAAGAAC
ATTCCCCGGC ATATGATCGG GCGCGAAAAG CGTGTGGTGG CCATCGAACA GTACCTGGCG
GTGAAGCGGG TATTTGATCC GGTCATGGAC GGGCTGCGTT CGGCGGTACG ATATGATCGT
ACTTACTTCG ACAAAATCGT TGCCTCACTA CTGCCGCTGC TGGAGAAACT CACCACCGGC
AAGACCGCCC AACTGCTGGC GCCAAACTAC ACCGACTTAG ATGACCCGCG GCCAATCTTC
GACTGGATGC AGATCATCCG AAAACGCGGC ATCGTCTACG TCGGTTTGGA TGCTCTGACC
GACGCCGAGG TGGCCGCCGC TGTGGGCAAC TCCATGTTCG CCGACTTGGT CTCGGTCGCC
GGACACATTT ACAAACACGG CATCGACCAT GGCCTGCCCC CATCGGGTAA CAGCAGTGAC
AAGTTGCCGA TCAACCTGCA CGCCGATGAG TTCAACGAGT TGATGGGGGA TGAATTCATC
CCGCTGATCA ATAAGGGCGG CGGTGCCGGT ATTCAGGTAA CCGCCTACAC CCAGACCCTC
AGTGATATCG AAGCACGTAT CGGCAACCGC GCCAAAGCTG GCCAGGTTAT TGGCAACTTC
AACACCCTGC AGATGCTGCG GGTGCGCGAA ACCGCCACCG CTGAACTGCT CACTCAGCAA
TTGCCCAAGG TCAACGTGCT GACCAAGACC CTGGTGTCGG GTGCCACCGA CACCTCCGAT
CCGGAAGCCC ATACGGACTT CACTTCGTCC TCGCAGGACC GCGTCAGCAG CACCAGCGTG
CCGTTGATCG AGCCTGCCCA CATCGTCAGT TTGCCCAAAG GGCAAATGTT CTCCTTCCAA
GCCGGTGGGC AGCTCTGGAA AGTCCGCATG CCCTTACCAA AACCCTCCAA CGACGATGCC
ATGCCCAAGG ACTTGCAGGA GCTCACCCAG CGAATGCGGG CCACCTACAA CACGCAGGCG
GGGCAATGGT GGAGCGCCAG TGGTGGCGGC CCAACAACAA ACTTCGATCT GGATCAGGTG
GGGTAG
 
Protein sequence
MAEHAMESKL RPAVELYTVA ICIAAAVLCV YSPWAVALSP EIGLVAALAY ALFGLIRLRQ 
AWEVLRYRRN IRRLPRYGLT SRQIPVSRKR LFMGRGFRWT RLHTQRLVEA QDPAVAHYVE
QPTRYRLARG LERRLEHAPF PFSTLARATA WDSAFNPLRP LPQVGGSPLL HGVEPDETEV
SLPLGERVGH TLVLGTTRVG KTRLAEVYIT QDIHRIEHEV VIVFDPKGDA DLLKRMYVEA
KRAGRDKEFY VFHLGWPEIS ARYNAVGRFG RISEVASRIA GQLSGEGNSA AFREFAWRFV
NIIARALIEL GRRPDYLQIQ RHVVNIDALF IEYAQQFFAK TDPKAWEVIV QLEGKLTEKN
IPRHMIGREK RVVAIEQYLA VKRVFDPVMD GLRSAVRYDR TYFDKIVASL LPLLEKLTTG
KTAQLLAPNY TDLDDPRPIF DWMQIIRKRG IVYVGLDALT DAEVAAAVGN SMFADLVSVA
GHIYKHGIDH GLPPSGNSSD KLPINLHADE FNELMGDEFI PLINKGGGAG IQVTAYTQTL
SDIEARIGNR AKAGQVIGNF NTLQMLRVRE TATAELLTQQ LPKVNVLTKT LVSGATDTSD
PEAHTDFTSS SQDRVSSTSV PLIEPAHIVS LPKGQMFSFQ AGGQLWKVRM PLPKPSNDDA
MPKDLQELTQ RMRATYNTQA GQWWSASGGG PTTNFDLDQV G