Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3012 |
Symbol | |
ID | 3712696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3450757 |
End bp | 3452862 |
Gene Length | 2106 bp |
Protein Length | 701 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_348741 |
Protein GI | 77459234 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.658628 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAGC ATGCAATGGA GTCCAAGCTC CGGCCAGCGG TGGAGCTATA CACCGTAGCG ATCTGCATCG CTGCCGCGGT GTTGTGCGTG TACTCGCCCT GGGCTGTGGC CCTGTCACCC GAGATCGGTC TGGTTGCAGC GCTGGCCTAT GCCCTGTTCG GCCTTATCCG GCTGCGACAA GCCTGGGAGG TGCTGCGTTA TCGGCGCAAT ATCCGTCGGC TGCCCCGCTA CGGGCTGACC AGTCGGCAGA TTCCGGTCAG CCGCAAGCGT CTGTTCATGG GCCGTGGCTT TCGCTGGACC CGCCTGCACA CCCAACGTTT GGTTGAGGCC CAGGATCCGG CGGTCGCCCA CTATGTCGAG CAACCGACCC GTTACCGTCT GGCCCGAGGA CTCGAACGCC GCCTGGAACA TGCACCGTTT CCGTTCTCGA CACTGGCCCG TGCCACCGCC TGGGACAGCG CCTTCAATCC GTTGCGCCCT TTGCCCCAAG TAGGTGGCTC GCCGCTGTTG CATGGGGTGG AGCCTGATGA AACAGAAGTC AGTCTACCGC TGGGCGAACG GGTCGGTCAC ACCCTGGTGC TCGGCACTAC CCGTGTCGGC AAGACGCGAC TCGCCGAGGT GTATATCACC CAGGACATTC ATCGCATCGA ACATGAAGTG GTCATAGTCT TCGATCCGAA GGGCGATGCC GACCTGCTCA AACGGATGTA CGTTGAAGCC AAGCGGGCAG GTCGAGATAA GGAGTTTTAT GTTTTCCATC TAGGCTGGCC GGAGATCTCC GCTCGATACA ATGCGGTGGG ACGCTTCGGG CGTATCTCGG AAGTGGCGTC ACGCATCGCC GGGCAGCTCA GCGGCGAAGG TAACTCCGCG GCCTTTCGCG AGTTTGCCTG GCGTTTCGTC AACATCATCG CCCGTGCCCT GATCGAGTTA GGCCGGCGTC CGGACTACTT GCAGATCCAA CGGCATGTGG TCAACATCGA CGCACTGTTC ATCGAGTACG CCCAGCAGTT TTTCGCCAAG ACCGACCCGA AGGCGTGGGA GGTGATCGTT CAGCTCGAAG GCAAGCTCAC CGAAAAGAAC ATTCCCCGGC ATATGATCGG GCGCGAAAAG CGTGTGGTGG CCATCGAACA GTACCTGGCG GTGAAGCGGG TATTTGATCC GGTCATGGAC GGGCTGCGTT CGGCGGTACG ATATGATCGT ACTTACTTCG ACAAAATCGT TGCCTCACTA CTGCCGCTGC TGGAGAAACT CACCACCGGC AAGACCGCCC AACTGCTGGC GCCAAACTAC ACCGACTTAG ATGACCCGCG GCCAATCTTC GACTGGATGC AGATCATCCG AAAACGCGGC ATCGTCTACG TCGGTTTGGA TGCTCTGACC GACGCCGAGG TGGCCGCCGC TGTGGGCAAC TCCATGTTCG CCGACTTGGT CTCGGTCGCC GGACACATTT ACAAACACGG CATCGACCAT GGCCTGCCCC CATCGGGTAA CAGCAGTGAC AAGTTGCCGA TCAACCTGCA CGCCGATGAG TTCAACGAGT TGATGGGGGA TGAATTCATC CCGCTGATCA ATAAGGGCGG CGGTGCCGGT ATTCAGGTAA CCGCCTACAC CCAGACCCTC AGTGATATCG AAGCACGTAT CGGCAACCGC GCCAAAGCTG GCCAGGTTAT TGGCAACTTC AACACCCTGC AGATGCTGCG GGTGCGCGAA ACCGCCACCG CTGAACTGCT CACTCAGCAA TTGCCCAAGG TCAACGTGCT GACCAAGACC CTGGTGTCGG GTGCCACCGA CACCTCCGAT CCGGAAGCCC ATACGGACTT CACTTCGTCC TCGCAGGACC GCGTCAGCAG CACCAGCGTG CCGTTGATCG AGCCTGCCCA CATCGTCAGT TTGCCCAAAG GGCAAATGTT CTCCTTCCAA GCCGGTGGGC AGCTCTGGAA AGTCCGCATG CCCTTACCAA AACCCTCCAA CGACGATGCC ATGCCCAAGG ACTTGCAGGA GCTCACCCAG CGAATGCGGG CCACCTACAA CACGCAGGCG GGGCAATGGT GGAGCGCCAG TGGTGGCGGC CCAACAACAA ACTTCGATCT GGATCAGGTG GGGTAG
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Protein sequence | MAEHAMESKL RPAVELYTVA ICIAAAVLCV YSPWAVALSP EIGLVAALAY ALFGLIRLRQ AWEVLRYRRN IRRLPRYGLT SRQIPVSRKR LFMGRGFRWT RLHTQRLVEA QDPAVAHYVE QPTRYRLARG LERRLEHAPF PFSTLARATA WDSAFNPLRP LPQVGGSPLL HGVEPDETEV SLPLGERVGH TLVLGTTRVG KTRLAEVYIT QDIHRIEHEV VIVFDPKGDA DLLKRMYVEA KRAGRDKEFY VFHLGWPEIS ARYNAVGRFG RISEVASRIA GQLSGEGNSA AFREFAWRFV NIIARALIEL GRRPDYLQIQ RHVVNIDALF IEYAQQFFAK TDPKAWEVIV QLEGKLTEKN IPRHMIGREK RVVAIEQYLA VKRVFDPVMD GLRSAVRYDR TYFDKIVASL LPLLEKLTTG KTAQLLAPNY TDLDDPRPIF DWMQIIRKRG IVYVGLDALT DAEVAAAVGN SMFADLVSVA GHIYKHGIDH GLPPSGNSSD KLPINLHADE FNELMGDEFI PLINKGGGAG IQVTAYTQTL SDIEARIGNR AKAGQVIGNF NTLQMLRVRE TATAELLTQQ LPKVNVLTKT LVSGATDTSD PEAHTDFTSS SQDRVSSTSV PLIEPAHIVS LPKGQMFSFQ AGGQLWKVRM PLPKPSNDDA MPKDLQELTQ RMRATYNTQA GQWWSASGGG PTTNFDLDQV G
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