Gene Pfl01_3008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3008 
Symbol 
ID3712692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3448305 
End bp3448976 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content59% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348737 
Protein GI77459230 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.347061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCT CGACGTTTCA AACCCTCATT ATTGGATTGC TTTGCCTGGC GGCCGCCGGG 
CTAAGTGGTG GATTGTATAA CCAGTATCAG CGCGTGGCGG AACTACAGAG CACGAACACG
CAATACCGAC AAACCCTGGA TACCCTGCAA CGTGATTCAA GCGCCCTCAA GGACACCCAG
GAGAAGCTGC AGTACGCGCT GAAAGATCTG AAACAGATGG TCGATACCGG CGAGCAACAG
GCCAATACCC TCGATCCGAT GTTGGATCAG TGGGCGCAAG AAATACAGGA ACTGCGCGAC
GGTCTGGCAG CCCGCGCCAC CGTGGCAGAC CTGACAGCGC TACGCGCACG CCTTGAGCAC
GTCGAGCAGC AGCTCCTGGG GCTCAAAACT CTGTCATCAA CTCCACCACC GACGTCTCCC
GCGACCAAGC TGAAAAAGAC CATTCGCCCC AAGCCCGCCC CGCTCTCGCC ACCGTTCTCG
GTGTTGAGTG TCGAGTCCCG TGGTGGTGAG CGTTTTCTGG CGGTCGCACC TCATGACAGT
CGCTCTCTCA CGGATGTCCG GCTGCTACAT AGCGGTGAGC AACTGGGGGC CTGGCACCTA
AAAGTACTGG AGCCGAACTC AGCCGTCTTC GCGGTGGCCA CTCAGCCAGA CCAGGCCGTG
CAAGTCCCTT GA
 
Protein sequence
MKASTFQTLI IGLLCLAAAG LSGGLYNQYQ RVAELQSTNT QYRQTLDTLQ RDSSALKDTQ 
EKLQYALKDL KQMVDTGEQQ ANTLDPMLDQ WAQEIQELRD GLAARATVAD LTALRARLEH
VEQQLLGLKT LSSTPPPTSP ATKLKKTIRP KPAPLSPPFS VLSVESRGGE RFLAVAPHDS
RSLTDVRLLH SGEQLGAWHL KVLEPNSAVF AVATQPDQAV QVP