| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2897 |
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| Symbol | |
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| ID | 3712661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 3338552 |
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| End bp | 3340795 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | Outer membrane autotransporter barrel |
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| Protein accession | YP_348628 |
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| Protein GI | 77459122 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.112297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.27831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGAA AAATATCGAA TGTACGTCTA CGCGATATCC GTTGGGGGCT AGTGCTTTCA
TCGTTTCTAG CTCCGTTTTC GCAAATCGCC ATCGGAGGAA ATCTGATCGG AGGGACTACA
ACGATTACTG GAGGCACTCC CGAGGACTGG ACGCTCAGTT CCAATGCAAC CTTGAATGTC
AATGGTGCTG ACACCTTGTT TATCAACACG GATGCTTCAG TCCTCAATGT CAATTCGGGT
AATACTCAAC AAATTGCTGC CCGCAATGGT TCACAAGTCA ATCTGAGCGG CGCGAACGTT
TCAGGTGCAA GTGGTTTGGC AGCGGTGACA CTTGTCAACA GCGATGGCAG CATCAAAAAC
AGCACGATCA ATGGTAATCG TGTCGGGCTT CAGGTTGTGC GTGACGCAAG TACCCTGACC
GGATCGACTG CCACCGTAAG CGGCAAAAGC GTTATAACCG GCGTGACGGG CGGCGCATTG
GTTAGCGCGT TCAGTCGTCT GGATATTGTC GACTCAACCC TTCAGGCAAC GGGTGCCAGC
AGTTATGGGG TGCGCCTGGC GAGCGGTCAG GCAACGGCAA CGGACAGCAC AATCATAGGA
GGACAAAACG GCGTAATCAT TGGTCTGGAC GGTAACTCCG TTCAGCCTGC GACACTGACC
CTTACCAAGA CAACCGTTGA AGGCGTAACG GGCTCCGCCA TTCTGGTCGA CTTCGCCAAC
GCTGGATCGT CCAGAGCGAC CATCACTCTG GACAATGCGA ATCTGTTGGC AGGCAACGGC
ACGATACTGG ATGTACGGGG CGGTGCAACG GCCTCGATGA CGGTGAATAA CAGTACCTTG
AATGGCAATG TCATCAATGA AGCTGGCAGC ACGGCTGAAT TGGTATTGCA AAACAACTCG
GCGCTGACCG GGCGTTTGGA AAACGTTTCT CATGCAACCA TCAACGACAC ATCTCGTTGG
GTTCTGGTGG GCGATGGCCA GATTGAAAAC CTTACTTTGA ACGGTGGCAC CGTGCGCTTC
GGCGCTGACA ATGCTTTTTA TCAATTAAAC GTCGGGCAAC TGGCGGGAAC TGGCCATTTC
GAGTTGGGCA CTGACTTCGC CACGGGTCAG ACAGACTTGC TGAATGTGAC GGGGACAGCG
ACGGGGCGCC ATGAGCTCGC AATCAGCAGT TCCGGTGTCG ATCCGGCGGC CGGTCAACCG
ATCCGGGTGG TGCAGACTGC CGGGGGCGAT GCAGAGTTCT TCATAAATCA TCCTGTCGAC
CTTGGCACCT ACTCATACGG TCTGGAAAAA AACGGCAATG ACTGGGTTCT TGATCCCACA
ACCAAAACGG TCAGCCCTGG AACGCGTTCG GTGTTGGCGC TATTTAAAAC TGCGCCAACC
GTGTGGTATG GCGAACTTGC CTCACTGCAT TCGCGCATGG GCGAGTTGCG TTTCAACGGT
GGGCAAGGTG GTGCGTGGGG GCGTACCTAT GGCAATAAAT ACAATGTCGC CGATGCCTCA
GGTGTCGGCT ACCAGCAAAC CCAGCAGGGT TTTACGTTAG GCGCTGATAC TCCACTGCCA
TTTGGAGACC GACAATGGCT GATCGGCGTG ATGGCAGGGC ACAGCAAGTC GGATCTGAAC
CTGGATGGCG GCACTTCCGG CACGGTTACA AGCAATTATC TGGGAACCTA CCTCACCTGG
ATTGACCCGC TCAGCGGTTA TTACGTTGAT GCTGTACTCA AGGTGAACCG CTTTCGCAAC
GACGCAAAAG TCGGCTTGAG TGACGGTGGC AGGGCCAAGG GCGATTACGA CAACACGGGA
TTGGGTGGTT CAGTCGAGCT GGGGCGGCGC ATCAAACTGG AAGATGGTGT TTTCATTGAG
CCCTACACCA AGTGGTCCGG CGTGGTCATT GAGGGCAAGC ATTTTTCCCT GGATAACGAC
ATGCAAGCCG ATGGCGACCG TACTCGATCA CTCCTGGGCG AGGCCGGCAT GACCGTGGGA
CGCACATTTG CGCTCGAACG CGATTTGAAA GTTCAACCCT ACGCCCGTGT CGCGATGGCG
CACGAGTTCG CGAAAAACAA TGAGGTCAAG GTCAACAACA ATGAATTCAA CAATGATTTG
TCGGGGAGTC GAGGTGAACT GGCCGTTGGC GTGGCAATTG CCATGACCGA CCGCCTGCAG
GTGCACTTTG ATGCGGACTA CAGCAACGGG AAAAATATAG AGCGGCCAAT AGGCTTGAAC
ATCGGTGCCC GTTATAACTT CTAG
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| Protein sequence | MQRKISNVRL RDIRWGLVLS SFLAPFSQIA IGGNLIGGTT TITGGTPEDW TLSSNATLNV
NGADTLFINT DASVLNVNSG NTQQIAARNG SQVNLSGANV SGASGLAAVT LVNSDGSIKN
STINGNRVGL QVVRDASTLT GSTATVSGKS VITGVTGGAL VSAFSRLDIV DSTLQATGAS
SYGVRLASGQ ATATDSTIIG GQNGVIIGLD GNSVQPATLT LTKTTVEGVT GSAILVDFAN
AGSSRATITL DNANLLAGNG TILDVRGGAT ASMTVNNSTL NGNVINEAGS TAELVLQNNS
ALTGRLENVS HATINDTSRW VLVGDGQIEN LTLNGGTVRF GADNAFYQLN VGQLAGTGHF
ELGTDFATGQ TDLLNVTGTA TGRHELAISS SGVDPAAGQP IRVVQTAGGD AEFFINHPVD
LGTYSYGLEK NGNDWVLDPT TKTVSPGTRS VLALFKTAPT VWYGELASLH SRMGELRFNG
GQGGAWGRTY GNKYNVADAS GVGYQQTQQG FTLGADTPLP FGDRQWLIGV MAGHSKSDLN
LDGGTSGTVT SNYLGTYLTW IDPLSGYYVD AVLKVNRFRN DAKVGLSDGG RAKGDYDNTG
LGGSVELGRR IKLEDGVFIE PYTKWSGVVI EGKHFSLDND MQADGDRTRS LLGEAGMTVG
RTFALERDLK VQPYARVAMA HEFAKNNEVK VNNNEFNNDL SGSRGELAVG VAIAMTDRLQ
VHFDADYSNG KNIERPIGLN IGARYNF
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