| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2879 |
|---|
| Symbol | |
|---|
| ID | 3712427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 3320421 |
|---|
| End bp | 3321515 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | luciferase-like |
|---|
| Protein accession | YP_348610 |
|---|
| Protein GI | 77459104 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.119535 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.229078 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAGC AAGCCGTGAA ATTTGCCTAC TGGGTGCCGA ACGTCAGCGG TGGGCTGGTG
GTCAGCAGGA TCGAGCAACG CACCGACTGG GGCATCGACT ACAACCGCAA ACTGGCGCAA
TTGGCCGAGG CGGCGGGTTT CGAATACGCC CTGACGCAAA TCCGCTTCAC CGCCGGTTAC
GGCGCCGAGT TTCAGCATGA ATCGGTTGCC TTCAGCCACG CGCTGCTCGC GGCCACCAGC
CAACTCAAAG TCATCGCCGC CATCTTGCCC GGCCCGTGGC AACCGGCACT GGCGGCCAAA
CAGTTGGCGA CCATCGATCA ACTCACCAAC GGCCGGATTG CGGTGAATAT CGTCAGCGGC
TGGTTCAGGG GCGAATTCCA GGCCATTGGC GAGCATTGGC TGGAGCACGA CGAGCGCTAT
CGTCGCTCGG AAGAGTTCAT CCGTTCATTG CGAGGGATCT GGAGTCAGGA CAACTTCACC
TTCCGTGGCG ATTTCTATCG CTTCGACAAC TACAGCCTCA AACCGAAGCC GCTGGGCCGC
CCGGAAATCT TTCAGGGCGG CAGCTCCCGT GCCGCACGTG ACATGGCGGC GCGGGTGTCG
GATTGGTATT TCACTAACGG CAACAGCGTC GAGGGCATCA AGGCACAGGT CGACGACATT
CGCGCCAAAG CGGCGGCAAA CCATCATTCA GTAAAAATCG GGGTGAATGC TTTTGTGATC
GCCCGAGATA CCGAAGAAGA AGCAAAAGCG GTGCTGGCGC AGATCATCGA TCAGGCTGAC
CCGGAAGCGG TGAATGCCTT CGGTGATGCA GCGAAACAGG CGGGCAGGGC GTCGCCGGAA
GGTGAGGGCA ACTGGGCCAA ATCGACCTTT GAGGATCTGG TGCAGTACAA CGACGGCTTC
AAGACCAATC TGATCGGTAC GCCGCAGCAG ATTGCCGAAC GGATCGTGGC GTTGAAAGCG
GTGGGGGTGG ACCTGGTATT GGCGGGTTTC CTGCATTTTC AGGAAGAGGT GGAGTATTTC
GGTCAGCGGG TGTTGCCGCT GGTGCGGGAG CTGGAAGCCA AAGCGCAATC GGCCCGGACT
GCCGAAGTTG CCTGA
|
|---|
| Protein sequence | MSQQAVKFAY WVPNVSGGLV VSRIEQRTDW GIDYNRKLAQ LAEAAGFEYA LTQIRFTAGY
GAEFQHESVA FSHALLAATS QLKVIAAILP GPWQPALAAK QLATIDQLTN GRIAVNIVSG
WFRGEFQAIG EHWLEHDERY RRSEEFIRSL RGIWSQDNFT FRGDFYRFDN YSLKPKPLGR
PEIFQGGSSR AARDMAARVS DWYFTNGNSV EGIKAQVDDI RAKAAANHHS VKIGVNAFVI
ARDTEEEAKA VLAQIIDQAD PEAVNAFGDA AKQAGRASPE GEGNWAKSTF EDLVQYNDGF
KTNLIGTPQQ IAERIVALKA VGVDLVLAGF LHFQEEVEYF GQRVLPLVRE LEAKAQSART
AEVA
|
|---|
| |